Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060595.seq
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   3.8  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   6.6  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   6.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 461 CWQIEFLFFNISTLYWFTDRGRWPNSM 381
           CW  E   F  +T+ ++  + RW  +M
Sbjct: 506 CWSFEIDGFKQATIKYYPSKERWEMTM 532


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 285 DIDTKCKPEISSSPQVSPNYNHTGNPV--MSQHTHRIRPTP 401
           D+ +   P  SSSPQ++P      +P   M + +++ +P P
Sbjct: 169 DMSSPGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNP 209


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 334 ETCGDDEISGLHFVSMSNSPVSFVL--STKLVPV 239
           E  G+D  SG+ F  MSNS ++ ++  +  LVP+
Sbjct: 446 ERFGEDLQSGIFFFGMSNSLINPLIYGAFHLVPI 479


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 334 ETCGDDEISGLHFVSMSNSPVSFVL--STKLVPV 239
           E  G+D  SG+ F  MSNS ++ ++  +  LVP+
Sbjct: 447 ERFGEDLQSGIFFFGMSNSLINPLIYGAFHLVPI 480


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,140
Number of Sequences: 2352
Number of extensions: 14290
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)