Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060594.seq
(683 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 28 0.32
Y17689-1|CAA76814.1| 111|Anopheles gambiae gSG2 protein protein. 27 0.73
AJ130950-1|CAA10259.1| 114|Anopheles gambiae SG2 protein protein. 27 0.73
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 26 0.96
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 2.9
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 24 3.9
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 3.9
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 5.1
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 5.1
AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical prote... 23 6.8
CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein ... 23 9.0
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 9.0
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 27.9 bits (59), Expect = 0.32
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 259 TDLSSPSTCTQNKRPEHTPLPSPV 330
+D+SSP T + P+ TP P+PV
Sbjct: 168 SDMSSPGAPTGSSSPQITPRPTPV 191
>Y17689-1|CAA76814.1| 111|Anopheles gambiae gSG2 protein protein.
Length = 111
Score = 26.6 bits (56), Expect = 0.73
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 13 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAG 180
++A L VA+++ A+ NY G+ G G + FSG + G +I + D G
Sbjct: 5 LVAFATLSVALVVVVAIPANFNYGGGGGYFINGTGQSFNFSGESNGTSIPGLPDFG 60
>AJ130950-1|CAA10259.1| 114|Anopheles gambiae SG2 protein protein.
Length = 114
Score = 26.6 bits (56), Expect = 0.73
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 13 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAG 180
++A L VA+++ A+ NY G+ G G + FSG + G +I + D G
Sbjct: 5 LVAFATLSVALVVVVAIPANFNYGGGGGYFINGTGQSFNFSGESNGTSIPGLPDFG 60
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 26.2 bits (55), Expect = 0.96
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = -1
Query: 278 DGDDKSVKP----NTSAKIRIRIIPTNNLGC*AVPRT--PASPTMPMAKPAARPENPTAK 117
DG + + P TS R + P + L A PR P +KP A P+ +A
Sbjct: 54 DGSTREIDPLGARATSVDCRTSLAPCSKLFA-AEPRVALPKLSATGASKPIAEPKAASAT 112
Query: 116 PAPK 105
PAP+
Sbjct: 113 PAPE 116
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 420 PKPYARWTRYRRRPSLCAS 364
P P +RW R+RRR L S
Sbjct: 3 PLPQSRWWRWRRRHLLTGS 21
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 24.2 bits (50), Expect = 3.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 452 TNVIYKSGRVLRNPMQGGP 396
T YK+G++ NP GP
Sbjct: 53 TTAAYKAGKIAPNPFTAGP 71
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 668 LLSPKLKHMCNKLIKYWGVIAR*HSCFNK 582
LLS +K + +I WG+I+ C NK
Sbjct: 531 LLSKVIKPRLDCIIGKWGIISTAQKCCNK 559
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 5.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 171 SHDAYGETG-SQTRESY-SQTSTQVDEPFVKGVVGWLLEGTSNQDSHD 34
S D GE+ S +R S +T++QVD KG L+GT+ HD
Sbjct: 1654 SSDVEGESECSSSRSSIVEETASQVDMKGRKGTNSSPLDGTTTIIIHD 1701
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 15 YCHLRSGRGCPDCWCPP 65
Y ++ SG GC C C P
Sbjct: 927 YWNIVSGNGCESCNCDP 943
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.8 bits (49), Expect = 5.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -1
Query: 176 ASPTMPMAKPAARPENPTAKPAP 108
A M + PAA PTA P P
Sbjct: 67 AEAAMDLEPPAAAQPTPTASPVP 89
>AJ302660-1|CAC35525.1| 195|Anopheles gambiae hypothetical protein
protein.
Length = 195
Score = 23.4 bits (48), Expect = 6.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 354 LSLKTRTGMVVAGSGSTLHRVSEHPSTLVYYICSLLVFTYLQTG 485
L K R + T+ + EH L + I +L V TYL G
Sbjct: 105 LERKLRQAADEGSTNGTVITIGEHTIRLPHNISNLTVNTYLING 148
>CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein
protein.
Length = 207
Score = 23.0 bits (47), Expect = 9.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 333 EHGRREWCVFRAFILCTGRW 274
E+G + VF F L TG+W
Sbjct: 95 ENGHEVYAVFPRFHLYTGQW 114
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.0 bits (47), Expect = 9.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 188 PRTPASPTMPMAKPAARPENPTAK 117
PRTP + + PA P++PT++
Sbjct: 1120 PRTPYGLSNGTSSPALPPKSPTSQ 1143
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,870
Number of Sequences: 2352
Number of extensions: 17865
Number of successful extensions: 41
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -