Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060594.seq
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 118 3e-27
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 118 3e-27
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 118 3e-27
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 118 3e-27
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 106 1e-23
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 106 1e-23
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 53 2e-07
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 2.3
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.3
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 2.3
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 2.3
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 29 3.1
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 3.1
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 5.4
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 5.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 7.1
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 7.1
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 7.1
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 7.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 7.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 7.1
Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical pr... 27 9.4
U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine rec... 27 9.4
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 9.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 118 bits (285), Expect = 3e-27
Identities = 60/83 (72%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVR
Sbjct: 66 GIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
GTAQQPRLFVGMILILIF+EVLG
Sbjct: 126 GTAQQPRLFVGMILILIFSEVLG 148
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 118 bits (285), Expect = 3e-27
Identities = 60/83 (72%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVR
Sbjct: 66 GIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
GTAQQPRLFVGMILILIF+EVLG
Sbjct: 126 GTAQQPRLFVGMILILIFSEVLG 148
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 118 bits (285), Expect = 3e-27
Identities = 60/83 (72%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVR
Sbjct: 66 GIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
GTAQQPRLFVGMILILIF+EVLG
Sbjct: 126 GTAQQPRLFVGMILILIFSEVLG 148
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 118 bits (285), Expect = 3e-27
Identities = 60/83 (72%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GII IYGLVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVR
Sbjct: 66 GIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
GTAQQPRLFVGMILILIF+EVLG
Sbjct: 126 GTAQQPRLFVGMILILIFSEVLG 148
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 106 bits (255), Expect = 1e-23
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GI+AIYGLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR
Sbjct: 74 GIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVR 133
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
+QQPR+FVGMILILIFAEVLG
Sbjct: 134 ALSQQPRMFVGMILILIFAEVLG 156
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 106 bits (255), Expect = 1e-23
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GIIAIYGLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 186
GI+AIYGLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR
Sbjct: 74 GIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVR 133
Query: 187 GTAQQPRLFVGMILILIFAEVLG 255
+QQPR+FVGMILILIFAEVLG
Sbjct: 134 ALSQQPRMFVGMILILIFAEVLG 156
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Frame = +1
Query: 16 IAIYGLVVAVLIAGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGF 153
+AI+G+++A + G L E + P L G++ G GL VG S L G
Sbjct: 102 VAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGL 161
Query: 154 AIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLG 255
A+GIVG A P LFV +++I IFA +G
Sbjct: 162 AVGIVGSGAAIADAANPALFVKILIIEIFASAIG 195
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 103 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVL 252
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E +
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAV 102
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Frame = +1
Query: 16 IAIYGLVVAVLIAGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGF 153
+AI+G+++A + G L E + P L G++ G GL VG S L G
Sbjct: 102 VAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGL 161
Query: 154 AIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLG 255
A+GIVG A P LFV +++I IFA +G
Sbjct: 162 AVGIVGSGAAIADAANPALFVKILIIEIFASAIG 195
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 103 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVL 252
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E +
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAV 102
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 439 TRVEGCSETLCKVDPLPATTIPVRVFRLR 353
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 185 RTPASPTMPMAKPAARPENPTAKPAPK 105
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 3 ARGYYCHLRSGRGCPDCWCPPGASQ 77
A GY+ ++ SG GC DC C P S+
Sbjct: 1071 ADGYF-NITSGDGCEDCGCDPTGSE 1094
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 185 RTPASPTMPMAKPAARPENPTAKPAPK 105
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 3 ARGYYCHLRSGRGCPDCWCPPGASQ 77
A GY+ ++ SG GC DC C P S+
Sbjct: 1071 ADGYF-NITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 3 ARGYYCHLRSGRGCPDCWCPPGASQ 77
A GY+ ++ SG GC DC C P S+
Sbjct: 1071 ADGYF-NITSGDGCEDCGCDPTGSE 1094
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 375 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 461
G++V GS S L++ +++ +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 260 VKPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 114
++P T A R+R P L PR P T A P +RP T +P
Sbjct: 81 IRPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 260 VKPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 114
++P T A R+R P L PR P T A P +RP T +P
Sbjct: 81 IRPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 191 VPRTPASPTMPMAKPAARPENPTAKPAPK 105
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 188 PRTPASPTMPMAKPAARPENPTAKPAPK 105
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 188 PRTPASPTMPMAKPAARPENPTAKPAPK 105
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 18 CHLRSGR-GCPDCWCPPGASQLPP 86
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 188 PRTPASPTMPMAKPAARPENPTAKPAP 108
P P P P + AA PE+P P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Frame = -1
Query: 338 ARSTGDGSGVCSGRLFCVQVDGDDKSVKPNTSAKIRIRIIPTNNLGC*AVPRTPASP-TM 162
AR G+G+G C G C P ++ + P N P+ P P T
Sbjct: 78 ARQAGEGNGQCEG---CCLPGAQGPPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTP 134
Query: 161 PMAKPAAR-PENPTAKPAP 108
P KP P P P P
Sbjct: 135 PPCKPCPEGPPGPAGPPGP 153
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 192 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 16
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 15 N 13
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 192 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 16
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 15 N 13
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -3
Query: 192 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 16
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 15 N 13
N
Sbjct: 669 N 669
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 188 PRTPASPTM--PMAKPAARPENPTAKPAPK 105
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 188 PRTPASPTM--PMAKPAARPENPTAKPAPK 105
PRTP +P + P +P A P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 188 PRTPASPTM--PMAKPAARPENPTAKPAPK 105
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 188 PRTPASPTM--PMAKPAARPENPTAKPAPK 105
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical
protein C32H11.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 424 TLPLLYITFVP-CSFSHISRPVQPCCCGCSHLET*ICIFLLKTFCKNDQTSIMVLLKHEC 600
+LP+ Y F P +FS ++RP GC + +++ KT ++ +++ + +
Sbjct: 4 SLPVDYNEFFPDINFSGLTRPTIFILLGCMSIVFPFYVYVYKTNRPKEEKALLFPIINCF 63
Query: 601 YRAMTPQYLINL 636
Y+ M Y I L
Sbjct: 64 YKIMKFTYWITL 75
>U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 34 protein.
Length = 355
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 538 LLKTFCKNDQTSIMVLLKHECYRAMTPQYLINLLHICFN 654
LL++ DQ ++ ++ECY T I LL IC N
Sbjct: 86 LLRSLVYWDQPCKIMFNEYECYPFYTANIFIRLLMICTN 124
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 272 DDKSVKPNTSAKIRIRIIPTNNLGC*AVPRTPA-SPTMPMAKPAARPENPTA 120
D + ++P+++A+ R+ + +N G P P+ S TMP P+A P N A
Sbjct: 714 DIEDLRPSSTAEFRV--VASNKHGP-GKPSLPSYSVTMPQQPPSAAPRNVAA 762
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 188 PRTPASPTMPMAKPAARPEN--PTAKPAPKWMNP 93
P PA P+MP + A+PE P P P P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,215,230
Number of Sequences: 27780
Number of extensions: 400845
Number of successful extensions: 1454
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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