Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060593.seq
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   4.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   4.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 335 IWNSNNIRRQFVARQVFNIFMSFXDYFVNF 246
           IW S    + F+  ++F + + +  +F+NF
Sbjct: 123 IWKSYKRTQIFITCELFFVILLWISFFLNF 152


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 455 QRQSSCSRLYFSKQSRADCSDKLMRHHK 372
           +R S C  +YF    R   +D+L  H K
Sbjct: 668 KRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 455 QRQSSCSRLYFSKQSRADCSDKLMRHHK 372
           +R S C  +YF    R   +D+L  H K
Sbjct: 668 KRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +1

Query: 103 QPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVY 225
           Q K    IVG G  G+ I  +  R A  ++    R   W Y
Sbjct: 238 QTKKLATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWY 278


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +1

Query: 103 QPKNKVCIVGSGNWGSAIAKIVGRNAASLSNFEDRVTMWVY 225
           Q K    IVG G  G+ I  +  R A  ++    R   W Y
Sbjct: 238 QTKKLATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWY 278


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 248 FFPSIISSYTHIVTLSSKFDRL 183
           FF +   SY HI T S++F R+
Sbjct: 128 FFVNEKQSYFHIATTSNEFIRV 149


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 43  VTY*FKYFVRDCNILDMADKQPKNKVCIVG 132
           VTY F  F       D+ ++  K K+ +VG
Sbjct: 200 VTYVFDLFYLSKRASDLCNEANKTKILLVG 229


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 270 THENVKYLPGHKLPSNVVAVP 332
           TH+  K++P +  P  ++A P
Sbjct: 418 THQFAKFMPLYSGPYKIIAKP 438


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 177 ISTNNFRNSRTPVSRSNDANF 115
           IS+    N+ TP + +N+ NF
Sbjct: 121 ISSTRGNNNNTPSATNNNTNF 141


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 246 EVNEIIXETHENVKYLPGHKLPSNVV 323
           EV E   + HE+  +  G ++P N++
Sbjct: 27  EVIETDPDFHESTMFNGGGEIPQNII 52


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 290 VFNIFMSFXDYFVNFFPSIIS 228
           V ++ M F  YF NF+  + S
Sbjct: 57  VVSVLMDFIAYFFNFWTILFS 77


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 177 ISTNNFRNSRTPVSRSNDANF 115
           IS+    N+ TP + +N+ NF
Sbjct: 69  ISSTRGNNNNTPSATNNNTNF 89


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 177 ISTNNFRNSRTPVSRSNDANF 115
           IS+    N+ TP + +N+ NF
Sbjct: 252 ISSTRGNNNNTPSATNNNTNF 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,501
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)