Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060590.seq
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 99 1e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 99 1e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 96 8e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 81 2e-14
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 78 2e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 77 4e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 7e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 76 9e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 74 3e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 74 4e-12
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 73 5e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 72 2e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 8e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 8e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 68 2e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 68 2e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 67 3e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 66 6e-10
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 66 6e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 66 7e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 65 1e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 64 2e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 62 1e-08
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 60 6e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 59 9e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 59 1e-07
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 59 1e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 1e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 3e-07
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 57 3e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 57 3e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 2e-06
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 53 6e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 52 1e-05
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 50 5e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 47 4e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 45 0.001
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.008
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 42 0.018
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.032
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 40 0.074
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.074
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 40 0.074
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.098
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 39 0.098
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 39 0.13
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 37 0.52
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.52
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 37 0.52
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 34 3.7
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 3.7
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.9
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 4.9
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 33 4.9
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 8.5
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 33 8.5
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 98.7 bits (235), Expect = 1e-19
Identities = 61/144 (42%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLPYLYEL*GLQXXXXXXXXXXXXXXXNXINSSK- 602
ISS SFDQ+P G+ + + +
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRN 211
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 212 LNTSFFDPAGGGDPILYQHLFWFF 235
Score = 77.8 bits (183), Expect = 2e-13
Identities = 45/94 (47%), Positives = 48/94 (51%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N LVPL+LGAPD+AFPR+ F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 98.7 bits (235), Expect = 1e-19
Identities = 61/144 (42%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLPYLYEL*GLQXXXXXXXXXXXXXXXNXINSSK- 602
ISS SFDQ+P G+ + + +
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRN 187
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 188 LNTSFFDPAGGGDPILYQHLFWFF 211
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 262 *DFDSYPPPL 291
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 95.9 bits (228), Expect = 8e-19
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -1
Query: 290 KGGG*ESKSYIIIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 111
K GG + IRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 110 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 12
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2
Query: 433 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 266
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 81.0 bits (191), Expect = 2e-14
Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS S Q P +++ + +
Sbjct: 156 ISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRN 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 216 LNTTFFDPAGGGDPILYQHLFWFF 239
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/92 (43%), Positives = 46/92 (50%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 285
N LVPL++GAPD+AFPR+ F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 77.8 bits (183), Expect = 2e-13
Identities = 51/144 (35%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS S Q P +++ + +
Sbjct: 155 VSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRN 214
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 215 LNTTFFDPAGGGDPILYQHLFWFF 238
Score = 69.3 bits (162), Expect = 8e-11
Identities = 39/92 (42%), Positives = 45/92 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 285
N LVPL++GAPD+AFPR+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 77.0 bits (181), Expect = 4e-13
Identities = 50/144 (34%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + Q P +++ + +
Sbjct: 155 VSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRN 214
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 215 LNTTFFDPAGGGDPILYQHLFWFF 238
Score = 69.3 bits (162), Expect = 8e-11
Identities = 39/92 (42%), Positives = 45/92 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 285
N LVPL++GAPD+AFPR+ F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 7e-13
Identities = 49/144 (34%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + ++P +++ + +
Sbjct: 156 LSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRY 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
FDPAGGGDP Y H++ F
Sbjct: 216 FNTTFFDPAGGGDPILYQHLFWFF 239
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 262 *DFDSYPPPLY 294
F PP L+
Sbjct: 101 ISFWLLPPALF 111
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 75.8 bits (178), Expect = 9e-13
Identities = 49/144 (34%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + Q P +++ + +
Sbjct: 155 VSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRN 214
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
L FDPAGGGDP Y H++ F
Sbjct: 215 LNTTFFDPAGGGDPILYQHLFWFF 238
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/94 (41%), Positives = 46/94 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N LVPL++GAPD+AFPR+ F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.9 bits (176), Expect = 2e-12
Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + + +++ + +
Sbjct: 138 VSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRN 197
Query: 603 LKYIIFDPAGGGDP-FYIHIY 662
FDPAGGGDP Y H++
Sbjct: 198 FNTSFFDPAGGGDPILYQHLF 218
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 262 *DFDSYPPPL 291
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 74.1 bits (174), Expect = 3e-12
Identities = 49/144 (34%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS + +LP +++ + +
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
+DPAGGGDP Y H++ F
Sbjct: 215 FNTSFYDPAGGGDPILYQHLFWFF 238
Score = 56.8 bits (131), Expect = 5e-07
Identities = 56/206 (27%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQD-EQFTPHF 360
N LVP+++GAPD+AFPR+ F PP L + + P
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 361 HLISHIEEDP*ILLFFHYI*QVFHQL*EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSI 540
L SH + +F ++ + L + +I
Sbjct: 134 GLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAI 193
Query: 541 FIXIITTCLAGAITIXLTVRNLNTSF 618
+ + LAGAIT+ LT RN NTSF
Sbjct: 194 LLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 73.7 bits (173), Expect = 4e-12
Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS + +LP +++ + +
Sbjct: 155 ISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRN 214
Query: 603 LKYIIFDPAGGGDP-FYIHIY 662
+DPAGGGDP Y H++
Sbjct: 215 FNTSFYDPAGGGDPILYQHLF 235
Score = 56.8 bits (131), Expect = 5e-07
Identities = 56/206 (27%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQD-EQFTPHF 360
N LVP+++GAPD+AFPR+ F PP L + + P
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLS 133
Query: 361 HLISHIEEDP*ILLFFHYI*QVFHQL*EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSI 540
L SH + +F ++ + L + +I
Sbjct: 134 GLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAI 193
Query: 541 FIXIITTCLAGAITIXLTVRNLNTSF 618
+ + LAGAIT+ LT RN NTSF
Sbjct: 194 LLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/144 (32%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + +LP +++ + +
Sbjct: 158 VSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRN 217
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
FDPAGGGDP Y H++ F
Sbjct: 218 FNTTFFDPAGGGDPILYQHLFWFF 241
Score = 55.6 bits (128), Expect = 1e-06
Identities = 53/206 (25%), Positives = 75/206 (36%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KMVQEQD-EQFTPHF 360
N VP+++GAPD+AFPR+ F PP L L ++ + P
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLS 136
Query: 361 HLISHIEEDP*ILLFFHYI*QVFHQL*EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSI 540
+ SH + +F ++ V L S +
Sbjct: 137 GITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAF 196
Query: 541 FIXIITTCLAGAITIXLTVRNLNTSF 618
+ + LAGAIT+ LT RN NT+F
Sbjct: 197 LLLLSLPVLAGAITMLLTDRNFNTTF 222
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 71.7 bits (168), Expect = 2e-11
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +3
Query: 315 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 494
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 495 FDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSKLKYIIFDPAGGGDP-FYIHIY 662
++P +++ + + + FDPAGGGDP Y H++
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLF 154
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 426 ISS 434
ISS
Sbjct: 144 ISS 146
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/92 (41%), Positives = 45/92 (48%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 189
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 190 XXXXN*LVPLILGAPDIAFPRIII*DFDSYPP 285
N L+PL++GAPD+AFPR+ F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 69.3 bits (162), Expect = 8e-11
Identities = 49/144 (34%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS S ++P +++ + +
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRN 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F+ AGGGDP FY H + F
Sbjct: 216 FNTSFFEVAGGGDPIFYQHAFWFF 239
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/144 (32%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS + +LP +++ + +
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRN 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F+ +GGGDP Y H++ F
Sbjct: 216 FNTSFFEVSGGGDPILYEHLFWFF 239
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/144 (32%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS + +LP +++ + +
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRN 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F+ +GGGDP Y H++ F
Sbjct: 216 FNTSFFEVSGGGDPILYEHLFWFF 239
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 426 ISS 434
ISS
Sbjct: 155 ISS 157
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 262 *DFDSYPPPLYY 297
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 381 GRSVDLAIFSLHLAGISS 434
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 66.5 bits (155), Expect = 6e-10
Identities = 45/144 (31%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
SS S ++P +++ + +
Sbjct: 163 ASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRN 222
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
FD +GGGDP Y H++ F
Sbjct: 223 FNTSFFDASGGGDPILYQHLFWFF 246
Score = 56.8 bits (131), Expect = 5e-07
Identities = 55/206 (26%), Positives = 77/206 (37%), Gaps = 3/206 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPLYY*FQEEL*KM-VQEQDEQFTPHF 360
N LVP+++G+PD+AFPR+ F PP L L ++ V + P
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLS 141
Query: 361 HLISHIEEDP*ILLFFHYI*QVFHQL*EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSI 540
+ SH + +F +I L S +
Sbjct: 142 SIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAF 201
Query: 541 FIXIITTCLAGAITIXLTVRNLNTSF 618
+ + LAGAIT+ LT RN NTSF
Sbjct: 202 LLLLAVPVLAGAITMLLTDRNFNTSF 227
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 66.1 bits (154), Expect = 7e-10
Identities = 46/144 (31%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
ISS + +LP +++ + +
Sbjct: 156 ISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRN 215
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F+ AGGGDP Y H++ F
Sbjct: 216 FNTSFFEVAGGGDPILYEHLFWFF 239
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +1
Query: 79 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRII 258
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 259 I*DFDSYPP 285
F PP
Sbjct: 100 NMSFWLLPP 108
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
P NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 64.5 bits (150), Expect = 2e-09
Identities = 43/144 (29%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
SS + D++ + + + +
Sbjct: 139 ASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRN 198
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
+ FDP+GGGDP Y H++ F
Sbjct: 199 MNTSFFDPSGGGDPILYQHLFWFF 222
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Score = 32.7 bits (71), Expect = 8.5
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Frame = +1
Query: 517 MSCRDYSIFIXIITTCL-----AGAITIXLTVRNLNTSF 618
MS +S+FI I L AGAIT+ LT RN+NTSF
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 426 ISS 434
ISS
Sbjct: 156 ISS 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRL 98
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 426 ISS 434
ISS
Sbjct: 182 ISS 184
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 410
P NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 312 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + +LP +++ + +
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F +GGGDP Y HI+ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + +LP +++ + +
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F +GGGDP Y HI+ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
+SS + +LP +++ + +
Sbjct: 173 LSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRN 232
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
F +GGGDP Y HI+ F
Sbjct: 233 FNTSFFVVSGGGDPLLYEHIFWFF 256
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 426 ISS 434
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 91 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = +3
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 57.2 bits (132), Expect = 3e-07
Identities = 31/63 (49%), Positives = 32/63 (50%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 426 ISS 434
I S
Sbjct: 159 IGS 161
Score = 40.7 bits (91), Expect = 0.032
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 413
P NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 414 HLAGISS 434
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 53.2 bits (122), Expect = 6e-06
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 186
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 187 XXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N L+PL++G PD+AFPR+ F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 54.4 bits (125), Expect = 2e-06
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 53.2 bits (122), Expect = 6e-06
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 426 ISSXXXXXXXXXXXXXXXXXXXSFDQLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSK 602
SS + ++P + + + +
Sbjct: 261 ASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRN 320
Query: 603 LKYIIFDPAGGGDP-FYIHIYLDF 671
FDPAGGGDP + HI+ F
Sbjct: 321 FGTTFFDPAGGGDPILFQHIFWFF 344
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 79 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 252
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 253 I 255
+
Sbjct: 203 L 203
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +1
Query: 10 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 183
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 184 XXXXXXN*LVPLILGAPDIAFPRIII*DFDSYPPPL 291
N VP+++G+PD+AFPR+ F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 50.0 bits (114), Expect = 5e-05
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 321 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 500
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 501 QLP-YLYEL*GLQXXXXXXXXXXXXXXXNXINSSKLKYIIFDPAGGGDP-FYIHIYLDF 671
++P +++ + + +D AGGGDP Y H++ F
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFF 281
Score = 36.3 bits (80), Expect = 0.69
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 121 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 324 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 354 PLSSNIAHRGRSVDLAIFSLHLAGISS 434
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 426 ISS 434
+SS
Sbjct: 157 MSS 159
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 41.5 bits (93), Expect = 0.018
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL +PG + + YN+++T+H N L+PL++GA D+AFPRI
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 262 *DFDSYPP 285
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.032
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 315 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG I D YN T H N ++PL+LGA D+AFPR+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIII 261
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 262 *DFDSY 279
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 39.5 bits (88), Expect = 0.074
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 97 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
G L GD Q YN ++T+H N +P++ G PD+ FPR+
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRL 100
Score = 39.5 bits (88), Expect = 0.074
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 246 PTNNNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 425
P NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 426 ISS 434
ISS
Sbjct: 158 ISS 160
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.098
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 324 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.1 bits (87), Expect = 0.098
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 256 II*DFDSYPPPL 291
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 94 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.52
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 327 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 36.7 bits (81), Expect = 0.52
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 318 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 434
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +2
Query: 260 YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 415
+KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 84 FKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 333 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 434
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 79 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 82 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 327 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 32.7 bits (71), Expect = 8.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 118 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 255
+ Y +VT HA N L+PL++GA D+AFP +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTL 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,158,546
Number of Sequences: 1657284
Number of extensions: 7493178
Number of successful extensions: 14737
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 14222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14700
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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