Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060588.seq
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   9.6  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 376 HIFGLXCLNCLXWYXRLAA 320
           HI  +  +NC  WY    A
Sbjct: 164 HIITMINMNCALWYINCRA 182


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 376 HIFGLXCLNCLXWYXRLAA 320
           HI  +  +NC  WY    A
Sbjct: 164 HIITMINMNCALWYINCRA 182


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 376 HIFGLXCLNCLXWYXRLAA 320
           HI  +  +NC  WY    A
Sbjct: 164 HIITMINMNCALWYINCRA 182


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 106 KKEIKIKINGPLHAVCVP 159
           +K IK+    PL  +C P
Sbjct: 112 RKFIKVTTKAPLECMCRP 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,793
Number of Sequences: 336
Number of extensions: 637
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)