Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060585.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   3.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.2  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   9.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.5  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 679 HFYPXPARKTAETWYTLRIS 620
           HF P   R +A  W+T R S
Sbjct: 129 HFVPLVQRLSAGDWFTSRTS 148


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 434 PTAESGLGGSVCCY 475
           PT +  LGG VC +
Sbjct: 511 PTGDGALGGEVCMW 524


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 550 SATTKGSSGNLFNNCPLA*TSAGT 479
           S  +  + GN + N PL  TSAGT
Sbjct: 405 SVHSHSTIGNDYYNSPLYHTSAGT 428


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
 Frame = -3

Query: 354 HPDRTYEYH---HHGHAEFGRQHVQYPMIQHWFG 262
           HP  T+ YH   H+    F   H  +      FG
Sbjct: 158 HPGMTFRYHFNVHNSGTHFWHSHSGFQRSDGTFG 191


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 142 HPAPSHSSLNTPTL 101
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 418 TVASTSDSGERPWRQRLLLPASQRSFRL 501
           T    + SGERP+R RL   A   S  L
Sbjct: 66  TTHMRTHSGERPYRCRLCKKAFSDSSTL 93


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 418 TVASTSDSGERPWRQRLLLPASQRSFRL 501
           T    + SGERP+R RL   A   S  L
Sbjct: 322 TTHMRTHSGERPYRCRLCKKAFSDSSTL 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,264
Number of Sequences: 336
Number of extensions: 3051
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)