Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060585.seq
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 155 2e-37
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 154 3e-37
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 154 3e-37
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 154 3e-37
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 153 6e-37
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 38 0.044
AF508785-1|AAM34265.1| 880|Homo sapiens GAS2-related protein is... 32 1.7
BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase bub... 30 8.9
BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein. 30 8.9
AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein. 30 8.9
AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein. 30 8.9
AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens ... 30 8.9
AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related prote... 30 8.9
AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related prote... 30 8.9
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 155 bits (375), Expect = 2e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ FPELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 72 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 131
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 132 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 190
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 191 WNDIKKVY-ASQRMRAGKG 208
Score = 74.5 bits (175), Expect = 3e-13
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +1
Query: 79 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 154 bits (373), Expect = 3e-37
Identities = 80/139 (57%), Positives = 87/139 (62%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
++G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 153 bits (371), Expect = 6e-37
Identities = 80/139 (57%), Positives = 86/139 (61%)
Frame = +3
Query: 255 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 434
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNT 117
Query: 435 XXXXXXXXXXXXXXXXXXXXQARGQLLKRFPELPLVVADKVQEINKTKQGCHLS*GASKA 614
+G ++ PELPLVV DKV+ KTK+ L KA
Sbjct: 118 TQKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLL-KKLKA 176
Query: 615 XSDILXVYQVSAVFRAGXG 671
+DI VY S RAG G
Sbjct: 177 WNDIKKVY-ASQRMRAGKG 194
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 82 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 37.5 bits (83), Expect = 0.044
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 290 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 454
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 455 GGSVCCYRRPSARS 496
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>AF508785-1|AAM34265.1| 880|Homo sapiens GAS2-related protein
isoform beta protein.
Length = 880
Score = 32.3 bits (70), Expect = 1.7
Identities = 21/72 (29%), Positives = 26/72 (36%)
Frame = +2
Query: 368 VSWWTYVRPHEALAALAPSRQPPTAESGLGGSVCCYRRPSARSG*RTIIEKISRASLGCS 547
V W TY L PS P E G G P R R++I + + G S
Sbjct: 321 VDWKTYTSSDRRLRPPTPSSPRPRRERGAGTGASREMAPFLRCQERSLIPSWRQPTAGDS 380
Query: 548 RQSPRDQQDQTG 583
SP+ Q G
Sbjct: 381 PPSPQSSSTQKG 392
>BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase
bubblegum family member 2 protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein.
Length = 616
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 224 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 264
>AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein.
Length = 479
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 87 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 127
>AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ32850 fis, clone TESTI2003419, moderately
similar to Homo sapiens very long-chain acyl-CoA
synthetase (BG1) ).
Length = 466
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 74 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 114
>AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related protein
protein.
Length = 649
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 257 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 297
>AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related protein
protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 130 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 8
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,357,166
Number of Sequences: 237096
Number of extensions: 2103855
Number of successful extensions: 5820
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5730
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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