Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060582.seq
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 3.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.7
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 4.7
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 6.3
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 6.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 6.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 6.3
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 8.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.3
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.6 bits (46), Expect = 3.6
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = -2
Query: 263 LVKKQVNALEFVDFSFANKTAEFGDRNPLFLVF 165
++ + +++ + V++ T GD P+FL F
Sbjct: 352 MLVQDISSPDAVEYGIIGPTTCMGDHKPVFLEF 384
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 402 TVILVWV*SAARKSPL 449
T++LVW SAA SP+
Sbjct: 306 TILLVWAISAAIGSPI 321
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.2 bits (45), Expect = 4.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 623 ASFLRSFFQDWLVVQGTA 676
A+F R Q W+ GTA
Sbjct: 344 AAFFRGMMQAWMTALGTA 361
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 221 KNRQTREHLLVSLPIKEFEII 283
KN QTREH L++ + ++I
Sbjct: 129 KNGQTREHALLAFTLGVKQLI 149
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 221 KNRQTREHLLVSLPIKEFEII 283
KN QTREH L++ + ++I
Sbjct: 56 KNGQTREHALLAFTLGVKQLI 76
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 185 SCHQTRP-SCSRRKNRQTRE 241
S H +R SCSR +NR+ +E
Sbjct: 228 SSHYSRERSCSRDRNREYKE 247
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 173 EXVGSCHQTRPSCSRRKNRQTRE 241
+ S + SCSR +NR+ RE
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRE 247
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 221 KNRQTREHLLVSLPIKEFEII 283
KN QTREH L++ + ++I
Sbjct: 72 KNGQTREHALLAFTLGVKQLI 92
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 221 KNRQTREHLLVSLPIKEFEII 283
KN QTREH L++ + ++I
Sbjct: 129 KNGQTREHALLAFTLGVKQLI 149
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 217 KEKSTNSRAFTCFFTNQRIRDH*FLPRPV 303
KEK R +C +R + FL RP+
Sbjct: 1 KEKHLTQRINSCDLLKKRNENDPFLKRPI 29
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 206 SCSRRKNRQTRE 241
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,365
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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