Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060578.seq
         (527 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E21B59 Cluster: PREDICTED: hypothetical protein;...    37   0.33 
UniRef50_Q94IK2 Cluster: Storekeeper protein; n=1; Solanum tuber...    33   4.1  
UniRef50_Q2GP36 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  
UniRef50_Q9HD89 Cluster: Resistin precursor; n=3; Theria|Rep: Re...    32   9.4  

>UniRef50_UPI0000E21B59 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 331

 Score = 36.7 bits (81), Expect = 0.33
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 327 LHP-KKWKPRGHVVPLPLGIGQRRLAPEIAQEAFSQ 431
           LHP ++W PR H  P   G GQ RL+P  A  +FS+
Sbjct: 27  LHPLRRWSPRRHRWPAGRGWGQERLSPAQASRSFSE 62


>UniRef50_Q94IK2 Cluster: Storekeeper protein; n=1; Solanum
           tuberosum|Rep: Storekeeper protein - Solanum tuberosum
           (Potato)
          Length = 399

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +3

Query: 96  KEAEGDEERSRENRVTRRPLGQKLLQKNPKNRMFTTQSG 212
           +E E DEE    + V ++P+ QKL+Q  P+   F+++SG
Sbjct: 47  EETEEDEEPKTAHPVVKKPISQKLVQ-TPQKPQFSSESG 84


>UniRef50_Q2GP36 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 627

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = +3

Query: 312 YKLTXLHPKKWKPRGHVVPLP--LGIGQRRLAPEIAQEAFS-QXPFRSQXYLIPGTGDIX 482
           +K T LH   WK    V+P+P          AP  A EAF+ Q     +  ++P  G + 
Sbjct: 299 HKSTSLHSSSWKKGSQVMPIPDDSVTTSPDCAPPAAPEAFARQRQSTDRKAIVPHVGRLR 358

Query: 483 X*FKXGAATTSXFXG 527
                G+AT S   G
Sbjct: 359 RNRTRGSATRSPSWG 373


>UniRef50_Q9HD89 Cluster: Resistin precursor; n=3; Theria|Rep:
           Resistin precursor - Homo sapiens (Human)
          Length = 108

 Score = 31.9 bits (69), Expect = 9.4
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -2

Query: 412 AISGANLRCPXPSGRG--TTCPRGFHFLGCS 326
           AIS   L C   + RG   TCPRGF   GC+
Sbjct: 43  AISSIGLECQSVTSRGDLATCPRGFAVTGCT 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,254,742
Number of Sequences: 1657284
Number of extensions: 9162693
Number of successful extensions: 20997
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20994
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)