Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060578.seq
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   6.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.4  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 399 LTCVVQXLVEGGPRVHAVSTF*GAALSICTGKIRNSGRRCMAL 271
           ++C+++  +  G +V A++TF  A L+   G ++ S     AL
Sbjct: 811 VSCILKSFLSVGNKVKAINTFAVALLTYSFGVMKWSNTDLEAL 853


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 284 LRPEFRIFPVQIDXAAP*KVETAWTRGPPSTRXWTT 391
           +RPEF IF  Q+D     +V T  T    ST   TT
Sbjct: 453 IRPEFVIFDPQVD-----EVSTYCTYSSDSTTTTTT 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,593
Number of Sequences: 2352
Number of extensions: 8932
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)