Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060577.seq
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 97 2e-20
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 93 2e-19
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 83 2e-16
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 81 8e-16
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 77 2e-14
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 76 3e-14
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 71 1e-12
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 70 2e-12
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 68 6e-12
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 56 3e-08
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 56 3e-08
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 52 4e-07
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 48 7e-06
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 46 2e-05
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 45 6e-05
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 44 9e-05
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 43 2e-04
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 42 3e-04
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 41 0.001
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 39 0.003
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 39 0.003
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 39 0.004
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 38 0.006
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 36 0.023
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 36 0.030
04_04_0023 + 22212226-22212450,22213511-22213753,22214189-22214320 32 0.49
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 31 0.64
01_03_0114 - 12649104-12649141,12650137-12650245,12650500-126506... 29 3.4
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 29 4.5
02_05_0790 - 31768131-31768269,31768343-31768503,31768845-317689... 28 6.0
06_03_0017 - 15465831-15466043,15466091-15466249,15466664-154669... 28 7.9
05_04_0409 - 21050479-21050637,21050732-21050872,21051170-210515... 28 7.9
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 28 7.9
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 50/66 (75%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR PF F +G GQVIKGWDQGLL MCVGEKRKL IPA +GYGERG+ IP ATL F+
Sbjct: 80 DRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFD 139
Query: 435 VELINI 452
ELI +
Sbjct: 140 TELIAV 145
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +1
Query: 88 LVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
L+ A A +G +VTEL+ V PE CT ++ GD + +HY G+L DG FDSS
Sbjct: 25 LILTASAKKSG-DVTELQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSS 78
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
+R P F++G GQVIKGWDQG+L MCVGEKRKL IP+ LGYG +G+ IP ATL F+
Sbjct: 171 ERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFD 230
Query: 435 VELINIGDSP 464
EL+ + P
Sbjct: 231 TELVAVNGEP 240
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 160 PEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
PE C+ ++ GD + +HY G L DG FDSS
Sbjct: 139 PESCSIQAHKGDRVKVHYRGKLTDGTDFDSS 169
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DRD PF F +G GQVIKGWD G+ M GE TIP L YGE G+ VIPP+ATL F+
Sbjct: 124 DRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFD 183
Query: 435 VELIN 449
VELI+
Sbjct: 184 VELIS 188
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGE---RGAGNVIPPHATL 425
D D+PF F+ QV++G D+ +L M GE +TIP +G R +V+PP++T+
Sbjct: 374 DGDEPFEFKTDEDQVVEGLDKAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTV 433
Query: 426 HFEVELIN 449
++EVEL++
Sbjct: 434 YYEVELVS 441
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 136 LKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
L+ ++V EG + GD + +HYTGTL DG KFDSS
Sbjct: 85 LRKKLVKEGEGWE-RPDAGDEVQVHYTGTLLDGTKFDSS 122
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 342 EKRKLTIPASLGYGERGAGNV-----IPPHATLHFEVELIN 449
EK LT+ G+GE+G IPP+ATLH +EL++
Sbjct: 281 EKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLELVS 321
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 81.0 bits (191), Expect = 8e-16
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR PF F +G G+VIKGWD+G+ M GE+ T+P L YGE G+ IPP+ATL F+
Sbjct: 90 DRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFD 149
Query: 435 VELI---NIGDSPPATNVFKEIDADKDK 509
VEL+ ++ D +FK++ A+ K
Sbjct: 150 VELLSWASVKDICKDGGIFKKVLAEGHK 177
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGN---VIPPHATL 425
D D+PF F+ QVI+G D+ ++ M GE + +P +G V+P ++T+
Sbjct: 324 DGDEPFEFRTDEEQVIEGLDRTVVTMKKGEVALVRLPPQHAFGSTETKQDLAVVPANSTV 383
Query: 426 HFEVELIN 449
+EVEL++
Sbjct: 384 WYEVELVS 391
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 178 KSKHGDMLTMHYTGTLDDGHKFDSS 252
+ + GD + +HYTGTL DG KFDSS
Sbjct: 64 RPESGDEVQVHYTGTLLDGTKFDSS 88
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 276 FQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-----AGNVIPPHATLHFEVE 440
F + G + + M GEK LT+ G+GE+G A +PP+ATL+ ++E
Sbjct: 209 FAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLE 268
Query: 441 LIN 449
L++
Sbjct: 269 LLS 271
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR PF F++G GQVIKGWD G+ M GE TIP L YGE G+ IP ATL F+
Sbjct: 86 DRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFD 145
Query: 435 VELI---NIGDSPPATNVFKEIDADKDK 509
VEL+ ++ D +FK+I + +K
Sbjct: 146 VELLSWTSVKDICQDGGIFKKILKEGEK 173
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGN---VIPPHATL 425
D +PF F+ +VI G D+ +L+M GE +TIP +G + V+PP++T+
Sbjct: 325 DEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTV 384
Query: 426 HFEVELIN 449
+EVEL++
Sbjct: 385 IYEVELVS 392
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 136 LKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
L+ +++ EG T GD + +HYTGTL DG KFDSS
Sbjct: 47 LRKKLLKEGEGWETPEV-GDEVEVHYTGTLLDGKKFDSS 84
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 342 EKRKLTIPASLGYGERG---AGN--VIPPHATLHFEVELIN 449
EK LT+ G+GE G AG +PP+ATL +EL++
Sbjct: 232 EKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELVS 272
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +3
Query: 270 FTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELIN 449
F F++G+G+VIKGWD G+ M VG+KR+LTIP S+GYG + G IP ++TL F+VEL+N
Sbjct: 535 FDFRLGIGEVIKGWDIGINGMRVGDKRRLTIPPSMGYGNKRMG-PIPQNSTLVFDVELVN 593
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 70.5 bits (165), Expect = 1e-12
Identities = 27/64 (42%), Positives = 48/64 (75%)
Frame = +3
Query: 261 DQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVE 440
++P+ F++G G+VI+GWD G+ M VG+KRKLT+P ++ YG + G V P ++++ +E+E
Sbjct: 333 EKPYKFKLGAGKVIRGWDVGICGMRVGDKRKLTVPPAMCYGSKAIGEV-PKNSSIIYEIE 391
Query: 441 LINI 452
L+ +
Sbjct: 392 LVKV 395
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 14/79 (17%)
Frame = +3
Query: 258 RDQPFTFQIGVGQVIKGWDQGLL------DMCVGEKRKLTIPASLGYGERGAG------- 398
R +P TF++GVG+VIKGWDQG++ M G KR L +P L YG RGAG
Sbjct: 137 RGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAGGKRSLRLPPELAYGARGAGCRGWEPT 196
Query: 399 -NVIPPHATLHFEVELINI 452
VIPP++TL F+VE+ +
Sbjct: 197 SCVIPPNSTLLFDVEMFRV 215
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 166 GCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
G ++ G ++ HYTG L+DG FDSS
Sbjct: 106 GTGAAAEQGQLIKAHYTGRLEDGTVFDSS 134
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +3
Query: 276 FQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 452
F++G G+VI GWD G+ M VG R+L IP LGYG+ G GN IPP+A L+F++EL+ +
Sbjct: 299 FKLGAGEVISGWDLGIDGMRVGGIRRLGIPPHLGYGDVGRGN-IPPNAWLNFDIELLKV 356
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 FTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPH---ATLHFEVE 440
F+F+IG G VIK WD + M VGE K+T YG G+ IPP ATL FEVE
Sbjct: 149 FSFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVE 208
Query: 441 LI 446
LI
Sbjct: 209 LI 210
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 264 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFEVE 440
+PF+F IG G VIKGWD+G++ M VGE ++ YG G I P++ L FE+E
Sbjct: 48 EPFSFNIGQGSVIKGWDEGVMTMQVGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIE 107
Query: 441 LIN 449
+++
Sbjct: 108 VLS 110
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +3
Query: 252 LDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGY--GERGAGN--VIPPHA 419
L++ QP+ F++G GQVIKG D+G+L M VG R+L IP L + G A + P +
Sbjct: 185 LEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSS 244
Query: 420 TLHFEVELINI 452
+ F+V L+ I
Sbjct: 245 PVMFDVNLLYI 255
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +3
Query: 270 FTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 413
F+F+IG G VIK WD L M VGE K+T YG G+ IPP
Sbjct: 60 FSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPPEIPP 107
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Frame = +3
Query: 258 RDQPFTFQIGVGQVIKGWDQGLLD------MCVGEKRKLTIPASLGYGERGAG 398
R +P T ++G G++++G +QG+ M VG KRKL IPA+L YG AG
Sbjct: 153 RGRPLTMRLGAGKILRGLEQGISGGGGVPPMLVGGKRKLMIPATLAYGPEPAG 205
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 157 VPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS*IAINLLRSKLALGK 297
V G + G ++ +HYT DG FDS+ L +L GK
Sbjct: 119 VEVGTGAQPPRGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGK 165
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 267 PFTFQIGV---GQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATL 425
P+ F IG G V+KG D G+ M VG +R + +P L YG++G IPP+AT+
Sbjct: 170 PYGFDIGNSERGNVLKGLDLGVEGMKVGGQRLIIVPPELAYGKKGV-QEIPPNATI 224
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 261 DQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGN----VIPPHATLH 428
D+PF F + GQVI G D+ ++ M GE + TIP + G+ +P +AT+
Sbjct: 23 DEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAVGSDQHQFAFVPRNATVV 82
Query: 429 FEVELINI 452
+++EL+++
Sbjct: 83 YKIELLSV 90
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 330 MCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINIGDSPPA 470
M VG KR++ +P LGYG++G N IPP A ++EL+ + PPA
Sbjct: 163 MKVGGKRRVIVPPELGYGKKGM-NEIPPDAPFELDIELLEV--VPPA 206
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 234 TQVRLELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGA----GN 401
TQ + D P F +G V+ G++ + M GEK TIP++L + G+ +
Sbjct: 25 TQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMTKAGSPASIPS 84
Query: 402 VIPPHATLHFEVELI 446
IPP+ TL FE+ELI
Sbjct: 85 NIPPNQTLRFEIELI 99
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 270 FTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHAT 422
F F+IG GQVI +++ + DM G R++ +P LGY + + P T
Sbjct: 173 FKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDNDYNKLGPKPTT 223
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQG----LLDMCVGEKRKLTIPASLGYGERGA--GNV---I 407
D +P +G +G +G L M G KR++ +P +LG+G+ GA G+ +
Sbjct: 173 DGKRPLALVMGSRPYTRGMCEGVEYVLRSMRAGGKRRVVVPPALGFGDDGADFGDAAAQV 232
Query: 408 PPHATLHFEVELINIGDSP 464
PP ATL + VE+ + +P
Sbjct: 233 PPGATLEYVVEVDKVSIAP 251
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 261 DQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVE 440
D+PF F + QV +G ++ +L M GE TIP + + V+P +++ +E+E
Sbjct: 326 DEPFKFMVDEEQVSEGLEEAVLTMREGEVSLFTIPP---HRVQDQLLVVPVGSSVTYEIE 382
Query: 441 LIN-IGDSPP 467
L++ + D PP
Sbjct: 383 LVSVVNDKPP 392
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 267 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASL-GYGERGAGNV---IPPHATLHFE 434
P TF +G V++G+ + M GEK TIP L G R ++ I P+ L F+
Sbjct: 89 PLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELAGTKSRCPVDIPGNIAPNEALRFD 148
Query: 435 VELINI 452
+ELI++
Sbjct: 149 IELISL 154
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +3
Query: 246 LELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNV-----IP 410
+ + + F + G + + + M GE+ L + G+GERG ++ +P
Sbjct: 198 MSVSMSEGIEFNLAEGFFCPAFARAVETMTEGEEAVLIVKPEYGFGERGRPSIGDEAGVP 257
Query: 411 PHATLHFEVELIN 449
P ATL+ ++L++
Sbjct: 258 PDATLYVYLQLMS 270
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +3
Query: 261 DQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVE 440
D+PF F + QV G ++ +L M GE TIP + V+PP +++ +E+E
Sbjct: 222 DEPFEFVVDEEQVSDGLEEAVLTMWEGEVSLFTIPPQCLQDQH---VVVPPGSSVTYEIE 278
Query: 441 LINI 452
L+++
Sbjct: 279 LVSV 282
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 276 FQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNV-----IPPHATLHFEVE 440
F + G + + + M GE+ L + G+GERG ++ +PP ATL+ ++
Sbjct: 104 FNLAEGFFCPAFARAVETMTEGEEVVLIVKLEYGFGERGRPSIGDEAAVPPDATLYVYLQ 163
Query: 441 LIN 449
L++
Sbjct: 164 LMS 166
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 330 MCVGEKRKLTIPASL-GYGERGAGNV---IPPHATLHFEVELINI 452
M GEK TIP L G R ++ +PP+ L F+VELI++
Sbjct: 6 MQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 324 LDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 452
L M VG KR+LTIP + GYG+ A IP ++ L +EVEL+ +
Sbjct: 483 LGMRVGGKRRLTIPPAQGYGD-VATPKIPANSWLVYEVELLEV 524
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 318 GLLDMCVGEKRKLTIPASLGYGERGAGNV--IPPHATLHFEVELINIGD 458
G+ +M GE+ L + LGYG+ G+ + +PP A L +EVELI D
Sbjct: 119 GVSNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDD 167
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 300 IKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNV--IPPHATLHFEVELINIGD 458
+ G G+ +M GE+ L + LGYG+ G+ + +PP A L +EVELI D
Sbjct: 118 MSGLGIGVGNMRSGERALLHVGWELGYGKEGSFSFPNVPPMADLLYEVELIGFDD 172
>04_04_0023 + 22212226-22212450,22213511-22213753,22214189-22214320
Length = 199
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 40 KLFVSSTMTTLRCVLMLVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDML 201
K+F SST+TTL + G F VT+L VV + +GC G++L
Sbjct: 10 KIFCSSTLTTLMIRRRPTVVNGGGFV---VTDLGNNVVFIVDGCGILGSKGELL 60
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 339 GEKRKLTIPASLGYGERGAG----NVIPPHATLHFEVELINI 452
GE+ TIP L + G+ + IPP TL FE+ELI++
Sbjct: 4 GERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISL 45
>01_03_0114 -
12649104-12649141,12650137-12650245,12650500-12650691,
12650797-12650904,12650986-12651162,12652331-12652459,
12653314-12653589,12653667-12653916,12654909-12655561
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 364 PHPWATESAEPAT*FLPTLHCISK-WS*STSVTLHRPQTCSRKSTPIRTNALPRRSERLF 540
P P AT + PA LPTL +S+ + + T H R +R++ALP + +
Sbjct: 28 PPPAATAAGGPAARLLPTLPGLSRLYPPPANSTAHHSWRLLRPLL-LRSDALPGTAAGVL 86
Query: 541 EEADGSRRXVVK*AKTSS 594
E AD R + A +++
Sbjct: 87 EAADAWRNLTLAVAASAA 104
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 466 GGESPMLINSTSKCNVAWGGITLPAPRS-P*PK 371
GGE P L+ NVA +T P+PRS P P+
Sbjct: 10 GGEVPSLLPDVEVTNVASFDVTAPSPRSQPSPR 42
>02_05_0790 -
31768131-31768269,31768343-31768503,31768845-31768973,
31769770-31769912,31770215-31770332,31771070-31771144,
31771528-31771620,31771750-31771879,31772038-31772126,
31772411-31772506,31772610-31772900
Length = 487
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 466 RPQTCSRKSTPIRTNALPRRSERLFEEADGS 558
RP+ S RT++LPRR +RLF A S
Sbjct: 18 RPRFPLGPSPTFRTSSLPRRHQRLFASAPSS 48
>06_03_0017 -
15465831-15466043,15466091-15466249,15466664-15466968,
15467083-15467324,15467818-15467825,15467954-15468418,
15468465-15468763,15468968-15469204,15469297-15469519
Length = 716
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 543 RSRWFPPTGGEVSEDIKQMLXSHDKLVEG---NLSSTKIKXQNRL 668
++ W+ P G + ++ + + L ++DK++E NL QN+L
Sbjct: 66 KNNWYRPQGAKTTDALSKKLAANDKILENINVNLDGFASAFQNQL 110
>05_04_0409 -
21050479-21050637,21050732-21050872,21051170-21051541,
21051699-21051701
Length = 224
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 342 EKRKLTIPASLGYGERGAGNVIPPHATLHF-------EVELINIGDSPPATNVFKEIDAD 500
E R L + G G V+ PHA LHF E+ + +G SP T + E +A
Sbjct: 113 ETRALQTAVAASSISSGGGVVLSPHALLHFADLGVAGELVAVLLGSSPTTTLLRLETEAP 172
Query: 501 KDKCSP 518
+P
Sbjct: 173 IRAAAP 178
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = -1
Query: 406 ITLPAPRSP*PK-DAGIVSLRF------SPTHMSSKPWSHPLITCPTPIWNVK 269
I+ PA PK D+G + L+ +P+ ++S+P PL+T PIW +
Sbjct: 363 ISQPAASQQSPKRDSGSLGLQIHHGSFEAPSELASRPHRFPLLTEHPPIWTAQ 415
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,261,240
Number of Sequences: 37544
Number of extensions: 428887
Number of successful extensions: 1167
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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