Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060577.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    75   3e-15
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.14 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.0  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 74.5 bits (175), Expect = 3e-15
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +3

Query: 258 RDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEV 437
           R +PF F +G G+VI+GWD+G+  M VG++ KL       YG RG   VIPP+A L F+V
Sbjct: 43  RGKPFKFSVGKGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDV 102

Query: 438 ELINI 452
           EL+ +
Sbjct: 103 ELLRV 107



 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 145 EVVSVPEGC-TTKSKHGDMLTMHYTGTLDDGHKFDSS 252
           ++V +  G  TT  K G    +HYTGTLDDG  FDSS
Sbjct: 4   QIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSS 40


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
 Frame = -1

Query: 580  LTSPPVGGNHLLLQIVAHFFAGEH---LSLSASISLNTFV-------AGGESPMLINSTS 431
            ++S P GG+HL      H     H   L+L++S S +T         A   SP++  S+S
Sbjct: 704  VSSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPIVATSSS 763

Query: 430  KCNVAWGGITLP-APRSP*PKDAGIVSLRFSPTHMSSKPWSHP 305
                  GG   P +  +P P          SP  +SSK   HP
Sbjct: 764  ----GGGGSNTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHP 802


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 374  GLRRARSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGN 490
            G RR+RSR R  S      RSG    +      K V G+
Sbjct: 1159 GSRRSRSRSRSRSGSRSRSRSGSGSRQASPISRKSVSGS 1197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,311
Number of Sequences: 2352
Number of extensions: 13992
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)