Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060577.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 89 2e-18
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 89 2e-18
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 71 6e-13
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 65 5e-11
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 65 5e-11
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 60 1e-09
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 45 4e-05
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 7.1
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 28 7.1
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 7.1
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 7.1
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +3
Query: 258 RDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEV 437
R++ FTF +G G VIKGWDQGLL+MCVGE+R LTIP LGYGERGA IP ++ L F+V
Sbjct: 68 RNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDV 127
Query: 438 ELINI 452
EL+ I
Sbjct: 128 ELMKI 132
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 VLMLVALAGATFAGPE--VTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
++ L+ L +A E + +L+ V E C KS+ GD L MHYTGTL DG +FDSS
Sbjct: 6 IVGLLCLLAIAYAADEQKIDKLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSS 65
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FE
Sbjct: 42 DRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFE 101
Query: 435 VELINI 452
VEL+ +
Sbjct: 102 VELLGV 107
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 175 TKSKHGDMLTMHYTGTLDDGHKFDSS 252
TK K+G +T HY TL++G K DSS
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSS 40
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FE
Sbjct: 42 DRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFE 101
Query: 435 VELINI 452
VEL+ +
Sbjct: 102 VELLGV 107
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 175 TKSKHGDMLTMHYTGTLDDGHKFDSS 252
TK K+G +T HY TL++G K DSS
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSS 40
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +3
Query: 258 RDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEV 437
R++PF F++G GQVIKG D + MC GEKRK+ IP L YGE G IP ++ LHF++
Sbjct: 189 RNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDL 248
Query: 438 EL 443
L
Sbjct: 249 SL 250
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +3
Query: 264 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 443
+P+TF +G G+VI G + + MCVGE+RK+ IP G+ E G V TL++ VEL
Sbjct: 72 KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDG-DEVEGKGETLYYFVEL 130
Query: 444 INI 452
+I
Sbjct: 131 KSI 133
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 163 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 252
EGCT K++ GD L YT L+DG DSS
Sbjct: 157 EGCTEKAQAGDTLHQQYTLNLEDGSFIDSS 186
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
DR F+F +G G VIKGWD G+ M GE + TI + GYG+ G+ IP ATL FE
Sbjct: 55 DRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFE 114
Query: 435 VEL 443
VEL
Sbjct: 115 VEL 117
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 178 KSKHGDMLTMHYTGTLDDGHKFDSS 252
K G + +HY GTL++G KFDSS
Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSS 53
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Frame = +3
Query: 264 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFEVE 440
+P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ V+
Sbjct: 74 KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQ 133
Query: 441 LINIGDSPPATN--------VFKEIDADKDKCSPAKK*ATI 539
L+++ + P + + D+DKC +K TI
Sbjct: 134 LVDLFRAVPGEKWTTDEGIVIEQTHKIDEDKCKKSKSGDTI 174
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +3
Query: 234 TQVRLELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 413
T V R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP
Sbjct: 186 TFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 245
Query: 414 HATLHFEVEL 443
A L+F++ L
Sbjct: 246 KARLYFDITL 255
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 9/101 (8%)
Frame = +3
Query: 264 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFEVE 440
+P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ V+
Sbjct: 110 KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQ 169
Query: 441 LINIGDSPPATN--------VFKEIDADKDKCSPAKK*ATI 539
L+++ + P + + D+DKC +K TI
Sbjct: 170 LVDLFRAVPGEKWTTDEGIVIEQTHKIDEDKCKKSKSGDTI 210
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +3
Query: 234 TQVRLELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 413
T V R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP
Sbjct: 222 TFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 281
Query: 414 HATLHFEVEL 443
A L+F++ L
Sbjct: 282 KARLYFDITL 291
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 234 TQVRLELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG 392
T++ DR+ PF F+IG G+VIKGWDQG+ M V EK KLTI + G+ E+G
Sbjct: 231 TKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGF-EKG 282
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 255 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 434
+ P F+IG G+VI G D G+ M VGE + GYG G +IP +A+L +
Sbjct: 124 ESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCK 183
Query: 435 VELINIG-DSPPATNVFKEIDADKDKCSPAKK*ATI 539
V L N DS V ++I D + +K T+
Sbjct: 184 VRLFNCSWDSYAKIGVDRQILVQGDNVTKSKNGQTV 219
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 175 TKSKHGDMLTMHYTGTLDDGHKFDSS 252
TKSK+G +T HY L DG K DSS
Sbjct: 211 TKSKNGQTVTCHYVLILVDGTKIDSS 236
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +3
Query: 234 TQVRLELDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 413
T V R+ PF F++ +VI G D + MC GE+R++ IP+ GYG +G+ IP
Sbjct: 181 TLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPG 240
Query: 414 HATLHFEVEL 443
A L FE+ L
Sbjct: 241 GARLFFEIVL 250
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +3
Query: 264 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 443
+P+TF +G QVI G D+ + MC+GE RK+ IP LG+ + G L++ V+L
Sbjct: 76 KPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPPKLGFAKDSTGQ------PLYYTVQL 129
Query: 444 INIGDSPP 467
+N+ + P
Sbjct: 130 VNLFRANP 137
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 267 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGA--GNVIPPHATLHFEVE 440
P T Q+G G ++ G D+GL MC E RK+ +P + + N+ L F +E
Sbjct: 118 PVTIQLGTGMIMPGLDKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIPNDENWLIFNIE 177
Query: 441 LINIGDSPPATNVFKEIDADKDK 509
++ I P FK +D ++D+
Sbjct: 178 MVEIKPYTPEIQ-FKFLDLNEDE 199
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -1
Query: 460 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 323
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 435 VELINIGDSPPATNVFKEIDADKDKCSPAKK*ATI*RSRWFPPTGGEVSED 587
VEL+++ D+ ++DA K KC+ K T R+ +F P G V D
Sbjct: 87 VELLDLEDNTEEEGANVDLDAQKTKCAVIK---TSTRATYFLPVVGLVDPD 134
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 491 DFLEHVCGRWRVTDVDQL 438
D + HVCG +R+T +DQ+
Sbjct: 232 DNISHVCGIYRITKIDQM 249
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -1
Query: 460 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 323
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,528,446
Number of Sequences: 27780
Number of extensions: 322469
Number of successful extensions: 778
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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