Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060576.seq
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.25 
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   3.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +1

Query: 1   RHEESCSKRVKINEMSAEEKISNFSLVNPNSNGIKMSSTSMNKPGVTAKKLIIKNFKSKP 180
           +  + C   V +  M ++       + +P++     SST+ NKP  +   ++IK     P
Sbjct: 398 KEAKHCGVNVPVPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKETMPLP 457


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 105 LYPVRIWIH 79
           LYPV +WIH
Sbjct: 72  LYPVLVWIH 80


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 182 TFQTIIRKRHGASC 223
           TFQT +  +HG SC
Sbjct: 103 TFQTNVVVKHGGSC 116


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 182 TFQTIIRKRHGASC 223
           TFQT +  +HG SC
Sbjct: 103 TFQTNVVVKHGGSC 116


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 182 TFQTIIRKRHGASC 223
           TFQT +  +HG SC
Sbjct: 103 TFQTNVVVKHGGSC 116


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/21 (28%), Positives = 16/21 (76%)
 Frame = +3

Query: 501 YVLKTLVYIQFGTWGLDLFSS 563
           +VLK ++++ + T+G+ +F +
Sbjct: 141 FVLKQVMFLCYSTYGIQVFGT 161


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +3

Query: 282 YQAVENMCSHKMASQLYVNLTNLVEAHVKANIEQFLSESMDRQVF 416
           Y+  + + +H+   QL++N   ++        EQF   S+D +++
Sbjct: 525 YRPWQTVYNHRPWQQLHLNKKQILGGEACLWSEQFDETSLDTRLW 569


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 610  PIYCTSLEQVYSLLYGDENRSRPH 539
            P  CT +   +++L GD+   +PH
Sbjct: 1849 PDLCTHIVYGFAVLNGDQLIIKPH 1872


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 121 MNKPGVTAKKLIIKNFKSKPNL 186
           +N PGVT   + ++    KPN+
Sbjct: 425 LNYPGVTVTNIEVQAKGGKPNV 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,314
Number of Sequences: 336
Number of extensions: 3187
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)