Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060575.seq
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 87  SRTDTPRSSGTPRAEFLQPGGSTSSRAAA 1
           ++  TPRSS    A  L P    S+ ++A
Sbjct: 149 NKVSTPRSSPAETASSLSPQSVASTASSA 177


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/33 (21%), Positives = 20/33 (60%)
 Frame = -2

Query: 265 ELFDSAFGHLSIGKLVLYHIMEVGLLVMLCILI 167
           ++F+S + H +     +Y+ + +GLL++  + +
Sbjct: 303 QVFESFYLHKATTLETVYYFISLGLLILRLVSV 335


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 87  SRTDTPRSSGTPRAEFLQPGGSTSSRAAA 1
           ++  TPRSS    A  L P    S+ ++A
Sbjct: 140 NKVSTPRSSPAETASSLSPQSVASTASSA 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,603
Number of Sequences: 336
Number of extensions: 2222
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)