Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060575.seq
         (728 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0964 + 8091086-8091139,8091548-8092222,8092285-8092518           31   1.2  
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501...    29   5.0  
02_03_0279 + 17250347-17252098                                         29   5.0  
09_04_0279 - 16349156-16349788,16352409-16353344                       28   8.7  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    28   8.7  

>07_01_0964 + 8091086-8091139,8091548-8092222,8092285-8092518
          Length = 320

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -2

Query: 349 EVLVEDLIDVFAESAASRAAIVYDDHLAELFDSAFGH 239
           EVL   L +V A    S A+I YD++L EL D   GH
Sbjct: 203 EVLERPLAEVAAMVRESIASIDYDEYLQELVDWVVGH 239


>08_02_0758 +
           20848078-20849579,20849660-20849850,20849944-20850179,
           20850254-20850973
          Length = 882

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 483 ELPRX-VHHLGVVIVCMILLGGVIACVLYRKPRTXKLI 593
           ++PR  +  LGVV +C+++LG VIA    R+ R  K +
Sbjct: 132 KIPRSAIVALGVVGLCLVVLGVVIAAFSVRRSRKFKKV 169


>02_03_0279 + 17250347-17252098
          Length = 583

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -2

Query: 364 YRHHFEVLVEDLIDVFAESAASRAAIVYDDHLAELFDSAFGHLSIGKLVLYHIME 200
           Y HH   ++       A +AAS   I+  + +A L DS +G +++   V +  +E
Sbjct: 375 YHHHHHHIIASSAASSAATAASVVRIMIREAIARLRDSGYGFVALAMRVKFAELE 429


>09_04_0279 - 16349156-16349788,16352409-16353344
          Length = 522

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -2

Query: 382 AERVESYRHHFEVLVEDLI-DV-FAESAASRAAIVYDDHLAELFDSAFGHLSIGK 224
           A R+ESY H     V  L+ D+ +A S+  R AIV  D+L+    +    + +GK
Sbjct: 140 ARRIESYEHIRREEVHALLRDLHYASSSGGRRAIVIKDYLSTASLNMITRMVMGK 194


>01_05_0117 -
           18300157-18301106,18301149-18301543,18302592-18302681,
           18303723-18303836,18303903-18304046,18316147-18316312,
           18316396-18317130,18317219-18317422,18317496-18318177,
           18318272-18318528,18318604-18319298,18319345-18319382,
           18319847-18319928,18320018-18320112,18320443-18320526,
           18320601-18320891,18321521-18321853,18321948-18322150,
           18322243-18322399,18322482-18322585,18322675-18322835,
           18323511-18323824,18324317-18324589,18324666-18324967,
           18325459-18325549,18326140-18326190,18326700-18326768,
           18326926-18327017,18327082-18327148,18328582-18328746,
           18329027-18329103,18329572-18329766,18330208-18330275,
           18331081-18331172,18331399-18331522,18331608-18331705,
           18332384-18332997,18333620-18333626
          Length = 2892

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = -2

Query: 232 IGKLVLYHIMEVGLLVMLCILILSVSFCPNRLASFSTTLRLFLALKASFKNGYSKVIWN 56
           I K + +H+  +GL ++  ++   ++F  +    F   +RLF+   A+   G SK++ N
Sbjct: 513 IRKDIAHHLNAIGLCLLSLLVYYCINFLSDSPMLFLLPIRLFIMESAN--GGESKIVIN 569


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,344,653
Number of Sequences: 37544
Number of extensions: 272394
Number of successful extensions: 815
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)