Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060575.seq
(728 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 27 0.45
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 27 0.59
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 26 1.0
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 26 1.0
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 26 1.4
AF457563-1|AAL68793.1| 48|Anopheles gambiae hypothetical prote... 25 1.8
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 2.4
AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transpor... 25 3.2
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 25 3.2
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 5.5
AY994089-1|AAX86002.1| 267|Anopheles gambiae hyp37.7-like precu... 23 7.3
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 9.7
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.45
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -2
Query: 232 IGKLVLYHIMEVGLLVMLCILILSVSFCPNRLASFSTTLRLFLALK 95
+GK +L+ ++ VGL V++ I+IL++ + + +R F L+
Sbjct: 315 LGKYLLFTMILVGLSVVITIIILNIHYRKPSTHKMAPWVRKFFILR 360
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 27.1 bits (57), Expect = 0.59
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 42 IRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
+R+E+F + P+L + FN +RK + NL
Sbjct: 213 VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNL 246
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 42 IRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
+R+E+F + P+L + FN +RK + N+
Sbjct: 217 VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNI 250
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 42 IRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
+R+E+F + P+L + FN +RK + N+
Sbjct: 217 VRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNI 250
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 25.8 bits (54), Expect = 1.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 24 IPRAXGIRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
I + +R+E+F E P+ + FN +RK + NL
Sbjct: 207 IMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNL 246
>AF457563-1|AAL68793.1| 48|Anopheles gambiae hypothetical protein
16 protein.
Length = 48
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 160 LIILGYKALPIILPPLYGTTL 222
+++L AL ++LPP Y TTL
Sbjct: 10 VLLLAAAALLLLLPPAYSTTL 30
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 433 PRRAQLAEQQDGQRRGESYL 492
P QL+EQQ G RRG S L
Sbjct: 527 PESPQLSEQQFGFRRGRSTL 546
>AF533894-1|AAM97679.1| 156|Anopheles gambiae ascorbate transporter
protein.
Length = 156
Score = 24.6 bits (51), Expect = 3.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 507 LGVVIVCMILLGGVIACVLYRKPRTXKLIFGDXEER 614
L V++ IL+GGV+ CVL LI G EER
Sbjct: 67 LSVLLGTTILVGGVLGCVL------DNLIPGTPEER 96
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 24.6 bits (51), Expect = 3.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 507 LGVVIVCMILLGGVIACVLYRKPRTXKLIFGDXEER 614
L V++ IL+GGV+ CVL LI G EER
Sbjct: 481 LSVLLGMTILVGGVLGCVL------DNLIPGTPEER 510
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 433 PRRAQLAEQQDGQRRGESYL 492
PR+ Q +QQ Q++GE Y+
Sbjct: 279 PRQQQQQQQQQQQQQGERYV 298
>AY994089-1|AAX86002.1| 267|Anopheles gambiae hyp37.7-like
precursor protein.
Length = 267
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 489 PRXVHHLGVVIVCMILLGGVIACVL--YRKPRTXKLIFG 599
P HHL ++ + GG+I + R PR +L+FG
Sbjct: 44 PEPNHHLATRLLRYFIFGGIIQAISAETRIPR-RRLVFG 81
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.0 bits (47), Expect = 9.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 93 RASRTDTPRSSGTPRAEFL 37
RA++ D+P + + RAEFL
Sbjct: 163 RAAKADSPENCHSNRAEFL 181
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,186
Number of Sequences: 2352
Number of extensions: 10262
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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