Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060575.seq
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069330-1|AAL39475.1| 200|Drosophila melanogaster LD04782p pro... 45 1e-04
AY069076-1|AAL39221.1| 997|Drosophila melanogaster GH09323p pro... 45 1e-04
AF461101-1|AAL66369.1| 997|Drosophila melanogaster dystroglycan... 45 1e-04
AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan... 45 1e-04
AF461099-1|AAL66367.1| 914|Drosophila melanogaster dystroglycan... 45 1e-04
AF277390-1|AAG17399.2| 649|Drosophila melanogaster dystroglycan... 45 1e-04
AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-P... 45 1e-04
AE013599-2170|AAF58068.2| 997|Drosophila melanogaster CG18250-P... 45 1e-04
AE013599-2169|AAM70943.3| 914|Drosophila melanogaster CG18250-P... 45 1e-04
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 36 0.075
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 30 2.8
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 30 2.8
BT003594-1|AAO39597.1| 533|Drosophila melanogaster HL01250p pro... 29 8.6
AY060832-1|AAL28380.1| 313|Drosophila melanogaster GM01605p pro... 29 8.6
AE014298-1345|AAF46506.3| 452|Drosophila melanogaster CG32699-P... 29 8.6
AE014298-1344|ABI30972.1| 533|Drosophila melanogaster CG32699-P... 29 8.6
>AY069330-1|AAL39475.1| 200|Drosophila melanogaster LD04782p
protein.
Length = 200
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 78 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 131
>AY069076-1|AAL39221.1| 997|Drosophila melanogaster GH09323p protein.
Length = 997
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 875 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 928
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 737 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 784
>AF461101-1|AAL66369.1| 997|Drosophila melanogaster dystroglycan type
II protein.
Length = 997
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 875 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 928
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 737 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 784
>AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan type
I protein.
Length = 1179
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 1057 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 1110
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 919 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 966
>AF461099-1|AAL66367.1| 914|Drosophila melanogaster dystroglycan
type III protein.
Length = 914
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 792 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 845
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 654 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 701
>AF277390-1|AAG17399.2| 649|Drosophila melanogaster
dystroglycan-like protein DG protein.
Length = 649
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 527 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 580
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 389 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 436
>AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-PC,
isoform C protein.
Length = 1179
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 1057 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 1110
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 919 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 966
>AE013599-2170|AAF58068.2| 997|Drosophila melanogaster CG18250-PA,
isoform A protein.
Length = 997
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 875 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 928
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 737 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 784
>AE013599-2169|AAM70943.3| 914|Drosophila melanogaster CG18250-PB,
isoform B protein.
Length = 914
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 513 VVIVCMILLGGVIACVLYR-KPRTXKLIFGDXEERXTFPLKGIXPYXFKTXFEER 674
V+IV M++ +IAC L+ + R+ K+ GD EER +F KGI P F+ +EE+
Sbjct: 792 VIIVAMLVAASIIACCLHWCRQRSGKMELGDEEERKSFRAKGI-PVIFQDEYEEK 845
Score = 36.3 bits (80), Expect = 0.043
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 FNAKNKRKVVEKLANLFGQKETDNIRIQSIT----NNPTSIIWYNTSL 227
FNA +RK VE++A L G T I+I+SIT ++ T + +YNT+L
Sbjct: 654 FNADLQRKFVERVAKLNGDPTTGQIQIRSITTHHDSDGTIVNFYNTTL 701
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 35.5 bits (78), Expect = 0.075
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2
Query: 2 AAALELVDPPGXRNSAR 52
AAALELVDPPG RNSAR
Sbjct: 7 AAALELVDPPGCRNSAR 23
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 24 IPRAXGIRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
I R +R+E+F E P+L + FN +RK + NL
Sbjct: 208 IMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNL 247
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 24 IPRAXGIRHEEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 143
I R +R+E+F E P+L + FN +RK + NL
Sbjct: 208 IMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNL 247
>BT003594-1|AAO39597.1| 533|Drosophila melanogaster HL01250p
protein.
Length = 533
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 284 DDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKXPPALYPGAP 445
+D SR +R+ VD+ D + + G C + + P A YPG P
Sbjct: 202 EDPNSRQNTIRDIVDRARSTD-DWPQVVIFAEGTCTNRTALIKFKPGAFYPGVP 254
>AY060832-1|AAL28380.1| 313|Drosophila melanogaster GM01605p
protein.
Length = 313
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 284 DDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKXPPALYPGAP 445
+D SR +R+ VD+ D + + G C + + P A YPG P
Sbjct: 63 EDPNSRQNTIRDIVDRARSTD-DWPQVVIFAEGTCTNRTALIKFKPGAFYPGVP 115
>AE014298-1345|AAF46506.3| 452|Drosophila melanogaster CG32699-PA,
isoform A protein.
Length = 452
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 284 DDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKXPPALYPGAP 445
+D SR +R+ VD+ D + + G C + + P A YPG P
Sbjct: 202 EDPNSRQNTIRDIVDRARSTD-DWPQVVIFAEGTCTNRTALIKFKPGAFYPGVP 254
>AE014298-1344|ABI30972.1| 533|Drosophila melanogaster CG32699-PB,
isoform B protein.
Length = 533
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 284 DDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKXPPALYPGAP 445
+D SR +R+ VD+ D + + G C + + P A YPG P
Sbjct: 202 EDPNSRQNTIRDIVDRARSTD-DWPQVVIFAEGTCTNRTALIKFKPGAFYPGVP 254
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,065,232
Number of Sequences: 53049
Number of extensions: 441008
Number of successful extensions: 1655
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1655
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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