Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060574.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   3.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   5.2  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   6.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   9.0  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   9.0  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   9.0  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 543 AVSLNWSASSRYTISTVRQPRRTS 614
           A S+NW  S+ YT+S  R  R T+
Sbjct: 179 ASSMNWRVSNAYTLSDHRVIRYTA 202


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 118 PEHDKGLLSDTFWRTPQRAVPGRPYQRVIPNE 213
           P ++   ++DT  R    +V   P+QR+I N+
Sbjct: 40  PNNNSNWVTDTTGRVAVVSVGDYPFQRIIDNQ 71


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 207 WDDPLVRPPRYSALRC 160
           W+D +V PP Y A  C
Sbjct: 292 WNDWIVAPPGYEAYYC 307


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 213 LVWDDPLVRPPRYSALRC 160
           L WDD ++RP  Y A  C
Sbjct: 192 LKWDDWIIRPHGYYANYC 209


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +3

Query: 99  YYGKSRTRT*QGFVV*HVLEDTSARCTGEALPKGHPKRGYVRVVVSAIPGVSNDA 263
           YYG+        F +  V EDT  +  G   P G   + +    V+     S DA
Sbjct: 150 YYGEDLQLAYDLFDMLDVSEDTRRKLAGGCFPSGPESQCFFFAYVTRFGAWSKDA 204


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +3

Query: 99  YYGKSRTRT*QGFVV*HVLEDTSARCTGEALPKGHPKRGYVRVVVSAIPGVSNDA 263
           YYG+        F +  V EDT  +  G   P G   + +    V+     S DA
Sbjct: 150 YYGEDLQLAYDLFDMLDVSEDTRRKLAGGCFPSGPESQCFFFAYVTRFGAWSKDA 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,052
Number of Sequences: 2352
Number of extensions: 10745
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)