Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060570.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    46   1e-06
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           26   0.96 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.7  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   5.1  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   6.8  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   6.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 45.6 bits (103), Expect = 1e-06
 Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
 Frame = +3

Query: 501 KELVGVXQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQI 656
           ++L+   QTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQI 265



 Score = 38.3 bits (85), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +1

Query: 349 EVTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++ +A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 102 TVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLE 221
           T++ +L+E   S +  LDL    +D  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -2

Query: 278  FLLKGWSEQNPNL---GDACSDLQRILF----SHQILQILQIYCH 165
            F+ KG  E +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/70 (22%), Positives = 26/70 (37%)
 Frame = +1

Query: 223 SEHASPRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVXVHNPIQYFEE 402
           SE     +   +++P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 403 ANFPDYVQQG 432
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 511 LAXFKRVPAKRWPTSCQ 561
           +A F  +PA RWP  C+
Sbjct: 169 VAIFVPLPADRWPRVCE 185


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 156 LATVAVDLEDLEDLVGKKNSLEVRTCVAQIGILFT 260
           L  +A+D+  L+  +GKK +L V   +  +G + +
Sbjct: 176 LMAIAIDMNPLKPRMGKKATLCVAASIWIVGTIIS 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,212
Number of Sequences: 2352
Number of extensions: 12455
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)