Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060570.seq
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 74 1e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 55 5e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 50 2e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 50 2e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 46 3e-05
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 46 3e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 43 2e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 3e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 3e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 42 3e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 42 3e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 42 3e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 4e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 4e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 4e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 40 0.002
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.009
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.009
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 38 0.009
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 37 0.012
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 37 0.015
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.062
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.58
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.77
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical ... 29 3.1
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.4
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 28 5.4
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 28 5.4
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 7.1
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 7.1
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXF 677
++++ + +TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+ +V+ F
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/90 (33%), Positives = 54/90 (60%)
Frame = +1
Query: 256 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVXVHNPIQYFEEANFPDYVQQGV 435
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 436 KTMGYKEPTPIQAQGWPIAMSGKN*LAXFK 525
+++PT IQ+ WPIAMSG++ ++ K
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAK 174
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 74.5 bits (175), Expect = 6e-14
Identities = 31/59 (52%), Positives = 47/59 (79%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXF 677
++++G+ +TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 262 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVXVHNPIQYFEEANFPDYVQQGVKT 441
Q FNKNFY+ H + + +V +N + V G+ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 442 MGYKEPTPIQAQGWPIAMSGKN*LAXFK----RVPAKRWP 549
Y++PTPIQA P A+SG++ L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXF 677
++++G+ +TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVXVHNPIQYFEEANFPDYVQQGVKTM 444
F KNFY + + + EV+ YR + +TV G+ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 445 GYKEPTPIQAQGWPIAMSGKN 507
Y +PT IQAQ P MSG++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRD 343
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIPQVA 668
++++GV +TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI +
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 669 AXFG 680
FG
Sbjct: 399 NKFG 402
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 334 YRNNHEVTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRD 340
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 435 KDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 605
+ NG ++ S ++ +GV QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 606 ---GPIALVLAPTRELAQQI 656
P LVL+PTRELAQQI
Sbjct: 160 QKPSPFVLVLSPTRELAQQI 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Frame = +1
Query: 250 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVXVHNPIQYFEEAN 408
F ++P ++ Y SP +++E Y N + V S V + P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 409 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKN 507
+ G ++ G+++P+PIQ+Q WP+ +SG++
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQD 123
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 435 KDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQP---PIRRGD 605
K G+ A + + ++++G+ TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 606 GPIALVLAPTRELAQQI 656
GP L++ P+RELA+QI
Sbjct: 266 GPFGLIIVPSRELARQI 282
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 650
++L+ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 651 QIPQVAAXF 677
QI + A F
Sbjct: 237 QIHKEATKF 245
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 343 NHEVTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 650
++L+ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 651 QIPQVAAXF 677
QI + A F
Sbjct: 221 QIHKEATKF 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 343 NHEVTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQ 650
++L+ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 651 QIPQVAAXF 677
QI + A F
Sbjct: 218 QIHKEATKF 226
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 343 NHEVTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQI 656
+++G +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +3
Query: 444 GLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 623
G ++ A + K+++ Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 624 LAPTRELAQQIPQVAAXFG 680
+APTRELAQQI +V + G
Sbjct: 103 MAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +3
Query: 444 GLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 623
G ++ A + K+++ Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 624 LAPTRELAQQIPQVAAXFG 680
+APTRELAQQI +V + G
Sbjct: 103 MAPTRELAQQIQKVMSALG 121
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +3
Query: 432 CKDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGP 611
C+ G + + L + K+++G+ +TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 612 IALVLAPTRELAQQIPQVAAXFGT 683
LVL PTRELA QI Q G+
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGS 137
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 444 GLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIAL 620
G ++ + S ++ + K ++G +TGSGKT A+++P + + + G GP A+
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAV 167
Query: 621 VLAPTRELAQQI 656
++APT+EL QI
Sbjct: 168 IIAPTKELITQI 179
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 656
K+++ QTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 382 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 656
K+++ QTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 382 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
P + F +++ P +++ V+ GY TPIQ P+ GK+ LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +3
Query: 435 KDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 614
KDN + +A S ++VG +TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 615 ALVLAPTRELAQQ 653
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 382 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 382 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 382 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
P + F EAN + +Q+ V GY + TPIQ P+ G + +A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 352 VTVSGVXVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
V +G V PI F + + +++++ +KT GY PTP+Q P G++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRD 205
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 647
++L+ QTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 648 QQI 656
QI
Sbjct: 264 LQI 266
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
+++G +TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALG 181
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
+++G +TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALG 181
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 394 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 394 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 37/51 (72%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 653
K+++ +TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQ 155
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 656
+++ QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 394 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
F EAN + +++ V GY + TPIQ P+ G + +A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQI 656
++++G +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQI 84
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQI 656
++++G +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQI 251
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 412 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 495
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
K++V + +TGSGKT A+++P + + R G AL+++PTRELA Q +V G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 376 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
K++V + +TGSGKT A+++P + + R G AL+++PTRELA Q +V G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 376 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 516
H +++ V + ++ G+ +PTPIQ + P M GK+ +A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXF 677
TGSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
K++ TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLS 243
Query: 681 T 683
T
Sbjct: 244 T 244
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 394 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 507
FE+ N + + GY +PTPIQ P+A++GK+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKD 187
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 653
++V TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 504 ELVGVXQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 653
++V TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 438 DNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 617
+ G ++ + + + ++++ + G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 618 LVLAPTRELAQQIPQV 665
+V+ PTRELA Q Q+
Sbjct: 115 MVIVPTRELALQTSQI 130
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +3
Query: 444 GLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 623
G ++ A + ++++ Q+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 624 LAPTRELAQQIPQVAAXFG 680
L+PTRELA QI +V G
Sbjct: 100 LSPTRELAVQIQKVVLALG 118
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +3
Query: 501 KELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
++++ Q+G+GKT + + + ++ Q +R AL+L+PTRELA QI +V G
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 429 RCKDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPA---IVHINNQPPIRR 599
R +N +++ + + ++ TGSGKTLA+ LP I+ + +
Sbjct: 140 RLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSS 199
Query: 600 GDGP--IALVLAPTRELAQQ 653
+ +A+VL PTRELA Q
Sbjct: 200 SNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 507 LVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
L+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 251 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 507 LVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
L+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 276 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 507 LVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIPQVAAXFG 680
L+ Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 660 LIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 656
TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 525 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 656
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 96 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 212
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVH 572
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical
protein Y56A3A.5 protein.
Length = 762
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 247 GFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN 345
GFCS+ P N+ + LK YEV+E++ N
Sbjct: 478 GFCSVSPSNQRAVEETIGKLKELGYEVKEFKVN 510
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 148 RIIAEFVASSKFGTTVSTAIIPV 80
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 148 RIIAEFVASSKFGTTVSTAIIPV 80
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/78 (20%), Positives = 41/78 (52%)
Frame = +3
Query: 429 RCKDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDG 608
R K++ R + + + ++++ ++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 609 PIALVLAPTRELAQQIPQ 662
+++ PTRE++ QI +
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/78 (20%), Positives = 41/78 (52%)
Frame = +3
Query: 429 RCKDNGLQRTDAYSSSRLADSYVWKELVGVXQTGSGKTLAYILPAIVHINNQPPIRRGDG 608
R K++ R + + + ++++ ++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 609 PIALVLAPTRELAQQIPQ 662
+++ PTRE++ QI +
Sbjct: 91 IQKVIVTPTREISVQIKE 108
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 224 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 123
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -1
Query: 498 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNXNATYSYLVIISVLFDFI 319
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 318 W*SFENCRMWIIKVF 274
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 289 PHPTVLKRSPYEVEEYRNNHEVTVSGVXVHNPIQYFEEAN---FPDYVQQGVKTMG 447
P PTVL SP+ V N + V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNN-----LEQVLTHQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 289 PHPTVLKRSPYEVEEYRNNHEVTVSGVXVHNPIQYFEEAN---FPDYVQQGVKTMG 447
P PTVL SP+ V N + V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNN-----LEQVLTHQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,034,717
Number of Sequences: 27780
Number of extensions: 287678
Number of successful extensions: 974
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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