Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060568.seq
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    25   1.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.6  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   7.8  

>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 554 FSTFSARSLKNSFSFHPVTRRGRDICSDCPRICPLISC 441
           F TF A+ L    SF  +T   + I +DCP +  LI C
Sbjct: 135 FRTFRAQILNLPPSF--LTSLTKGIITDCPEVQCLIRC 170


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 251 RGRFEDRVLC*DVRQGPV 198
           R  FEDRVL  D  +GPV
Sbjct: 661 RSYFEDRVLYFDTSEGPV 678


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 249 RKVRGSSSLLGCTPGPCLDXLRLCNIXTTWDTLGK 145
           R+ R S  L+GC P   L+  +   + ++W  + +
Sbjct: 23  RRPRLSRFLVGCIPVAVLNVFQFLKLYSSWGDMSE 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,674
Number of Sequences: 2352
Number of extensions: 10229
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)