Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060568.seq
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    24   1.4  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    24   1.4  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   5.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.7  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = -3

Query: 482 ICSDCPRI---CPLISCKCP 432
           +C   PRI    PL+SC CP
Sbjct: 46  LCLPAPRINSKSPLLSCACP 65


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = -3

Query: 482 ICSDCPRI---CPLISCKCP 432
           +C   PRI    PL+SC CP
Sbjct: 46  LCLPAPRINSKSPLLSCACP 65


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 326 RDPRLNKGLAFTLEERXALGIHGLLAA 406
           + PRL  G+   L     LG++GL+ A
Sbjct: 124 QQPRLFVGMILILIFAEVLGLYGLIVA 150


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 431 LDICRISVDRY 463
           L +C IS+DRY
Sbjct: 127 LSLCAISIDRY 137


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 431 LDICRISVDRY 463
           L++C IS+DRY
Sbjct: 114 LNLCAISLDRY 124


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 431 LDICRISVDRY 463
           L++C IS+DRY
Sbjct: 154 LNLCAISLDRY 164


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 407 WPPKDRECRE 378
           W P+D EC E
Sbjct: 199 WQPEDEECTE 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,788
Number of Sequences: 438
Number of extensions: 3012
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)