Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060564.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.8  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   6.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.0  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 111 TSRPETPGPQPPSPCNVRPCVKTVSL 188
           + R +TPG  PPS   VR   KT+SL
Sbjct: 886 SQRVKTPGDVPPSVRKVR-ASKTLSL 910


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 146 FPMQCSALRKNGFVMLKG 199
           +P++ SA RK G +ML G
Sbjct: 181 YPLRVSAARKRGKIMLGG 198


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 536 HRRQSKTQLSXKLNQLQ 586
           HR+Q++ QLS +L Q Q
Sbjct: 385 HRKQTQLQLSPRLQQQQ 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,151
Number of Sequences: 2352
Number of extensions: 13509
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)