Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060561.seq
(686 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06994-1|CAA30052.1| 325|Homo sapiens protein ( Human mRNA for ... 134 2e-31
J04444-1|AAA52135.1| 325|Homo sapiens protein ( Human cytochrom... 134 2e-31
DQ300360-1|ABB96244.1| 325|Homo sapiens cytochrome c-1 protein. 134 2e-31
CR541674-1|CAG46475.1| 325|Homo sapiens CYC1 protein. 134 2e-31
BT019798-1|AAV38601.1| 325|Homo sapiens cytochrome c-1 protein. 134 2e-31
BC024650-1|AAH24650.1| 315|Homo sapiens Unknown (protein for IM... 134 2e-31
BC020566-1|AAH20566.1| 325|Homo sapiens cytochrome c-1 protein. 134 2e-31
BC015616-1|AAH15616.1| 325|Homo sapiens cytochrome c-1 protein. 134 2e-31
BC001006-1|AAH01006.1| 325|Homo sapiens cytochrome c-1 protein. 134 2e-31
M16597-1|AAA35730.1| 227|Homo sapiens protein ( Human cytochrom... 130 6e-30
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 34 0.41
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 34 0.41
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 34 0.41
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 34 0.41
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 34 0.41
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 34 0.41
AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens ... 34 0.41
AK074434-1|BAB85082.1| 293|Homo sapiens protein ( Homo sapiens ... 34 0.41
AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens ... 34 0.41
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 34 0.41
AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ298460-1|CAC01149.1| 116|Homo sapiens immunoglobulin heavy ch... 31 3.8
BC130474-1|AAI30475.1| 723|Homo sapiens tripartite motif-contai... 30 6.7
BC130472-1|AAI30473.1| 723|Homo sapiens tripartite motif-contai... 30 6.7
AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protei... 30 6.7
>X06994-1|CAA30052.1| 325|Homo sapiens protein ( Human mRNA for
cytochrome c1. ).
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLEVHPPSYPWSHRGLLS 103
>J04444-1|AAA52135.1| 325|Homo sapiens protein ( Human cytochrome
c-1 gene, complete cds. ).
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>DQ300360-1|ABB96244.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>CR541674-1|CAG46475.1| 325|Homo sapiens CYC1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>BT019798-1|AAV38601.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAMALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>BC024650-1|AAH24650.1| 315|Homo sapiens Unknown (protein for
IMAGE:4470223) protein.
Length = 315
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 81 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 140
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 141 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 178
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 170 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 229
Query: 661 GAISM 675
AI+M
Sbjct: 230 QAIAM 234
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 13 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 69
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 70 SAVSASDLELHPPSYPWSHRGLLS 93
>BC020566-1|AAH20566.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>BC015616-1|AAH15616.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>BC001006-1|AAH01006.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 134 bits (325), Expect = 2e-31
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = +2
Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
P S P + L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AA
Sbjct: 91 PPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAA 150
Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
EV ++DGP+E+G F RPGKL DY P PYPN AARAA
Sbjct: 151 EVEVQDGPNEDGEMFMRPGKLFDYFPKPYPNSEAARAA 188
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 180 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 239
Query: 661 GAISM 675
AI+M
Sbjct: 240 QAIAM 244
Score = 52.4 bits (120), Expect = 1e-06
Identities = 35/84 (41%), Positives = 43/84 (51%)
Frame = +3
Query: 3 ARATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALE 182
ARA G +C AR + L PQA LS+ + G ++ RKV LS L L AL
Sbjct: 23 ARAR-GLLCSARP-GQLPLRTPQAVALSSKS-GLSRGRKVMLSALGMLAAGGAGLAVALH 79
Query: 183 QSVQASGSEAHPPHNPWNHSGWFS 254
+V AS E HPP PW+H G S
Sbjct: 80 SAVSASDLELHPPSYPWSHRGLLS 103
>M16597-1|AAA35730.1| 227|Homo sapiens protein ( Human cytochrome
c1 mRNA, partial cds. ).
Length = 227
Score = 130 bits (313), Expect = 6e-30
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +2
Query: 245 LVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDE 424
L+ LDH S+RRG++VYKQVC +CHS+ ++A+R+LV V +TEDEAK AAEV ++DGP+E
Sbjct: 3 LLSSLDHTSIRRGFQVYKQVCASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNE 62
Query: 425 EGNYFERPGKLSDYLPSPYPNENAARAA 508
+G F RPGKL DY P PYPN AARAA
Sbjct: 63 DGEMFMRPGKLFDYFPKPYPNSEAARAA 90
Score = 89.4 bits (212), Expect = 1e-17
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = +1
Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
P + NNGA PPDLS I R GGEDY+F+LLTGY EPP GV LREG +NPY PG
Sbjct: 82 PNSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPG 141
Query: 661 GAISM 675
AI+M
Sbjct: 142 QAIAM 146
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 508 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 550
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 364 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 406
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 508 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 550
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 443 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 485
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 395 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 437
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 527 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 569
>AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ41882 fis, clone OCBBF2022351, weakly similar
to TIPD PROTEIN. ).
Length = 428
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 348 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 390
>AK074434-1|BAB85082.1| 293|Homo sapiens protein ( Homo sapiens
cDNA FLJ23854 fis, clone LNG06315. ).
Length = 293
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 186 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 228
>AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22677 fis, clone HSI10648. ).
Length = 173
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 93 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 135
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.41
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 475 SIPQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
S P KCGS + PD S + +G G YI+++LTG +E
Sbjct: 443 SAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 485
>AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14948 fis, clone PLACE2000164, weakly similar to
TIPD PROTEIN. ).
Length = 504
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 490 KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYME 603
KCGS + PD S + +G G YI+++LTG +E
Sbjct: 429 KCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVE 466
>AJ298460-1|CAC01149.1| 116|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 116
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 87 TNTQGWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSPW 260
T QG+T + L T + L + +V + HN W+ S WF PW
Sbjct: 59 TYAQGFTGRFVLSLDTSVNTAYLEISSLKTADTAVYYCARDGQRNHNFWSGSNWFDPW 116
>BC130474-1|AAI30475.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 30.3 bits (65), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 664 HLLXSMDCSSVPHVALHQQEVPCNQSVARRC 572
HL+ ++C + LH +PCN S+ +C
Sbjct: 139 HLVNHLNCPMCSRLRLHSFMLPCNHSLCEKC 169
>BC130472-1|AAI30473.1| 723|Homo sapiens tripartite
motif-containing 42 protein.
Length = 723
Score = 30.3 bits (65), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 664 HLLXSMDCSSVPHVALHQQEVPCNQSVARRC 572
HL+ ++C + LH +PCN S+ +C
Sbjct: 139 HLVNHLNCPMCSRLRLHSFMLPCNHSLCEKC 169
>AK097416-1|BAC05042.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ40097 fis, clone TESTI2004169. ).
Length = 708
Score = 30.3 bits (65), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 664 HLLXSMDCSSVPHVALHQQEVPCNQSVARRC 572
HL+ ++C + LH +PCN S+ +C
Sbjct: 139 HLVNHLNCPMCSRLRLHSFMLPCNHSLCEKC 169
>AF521868-1|AAO14945.1| 723|Homo sapiens tripartite motif protein
42 protein.
Length = 723
Score = 30.3 bits (65), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 664 HLLXSMDCSSVPHVALHQQEVPCNQSVARRC 572
HL+ ++C + LH +PCN S+ +C
Sbjct: 139 HLVNHLNCPMCSRLRLHSFMLPCNHSLCEKC 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,405,496
Number of Sequences: 237096
Number of extensions: 2691448
Number of successful extensions: 12264
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12255
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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