Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060561.seq
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...   155   5e-38
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...   155   5e-38
AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p pro...   135   5e-32
AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-P...   135   5e-32

>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score =  155 bits (376), Expect = 5e-38
 Identities = 68/88 (77%), Positives = 75/88 (85%)
 Frame = +2

Query: 245 LVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDE 424
           L   LDH SVRRGYEVYKQVC ACHS+QYIA+RNLV VTHTE EAKAEA ++ +KDGPD+
Sbjct: 82  LFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGPDD 141

Query: 425 EGNYFERPGKLSDYLPSPYPNENAARAA 508
            GNY+ RPGKLSDY PSPYPNE AARAA
Sbjct: 142 TGNYYTRPGKLSDYFPSPYPNEEAARAA 169



 Score =  103 bits (248), Expect = 2e-22
 Identities = 47/65 (72%), Positives = 51/65 (78%)
 Frame = +1

Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
           P  +     NNGAYPPDLS I S RKGGEDYIF+LLTGY + PAGVVLREGQ +NPY PG
Sbjct: 161 PNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPG 220

Query: 661 GAISM 675
           GAISM
Sbjct: 221 GAISM 225



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 40/81 (49%)
 Frame = +3

Query: 9   ATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALEQS 188
           AT+ R  G RLLK    +  Q  +  ++   W    K  +  L        AL++ALEQS
Sbjct: 3   ATLRRFHGLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALEQS 62

Query: 189 VQASGSEAHPPHNPWNHSGWF 251
           VQASG E H P   WNH G F
Sbjct: 63  VQASGGEVHSPAQLWNHKGLF 83


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score =  155 bits (376), Expect = 5e-38
 Identities = 68/88 (77%), Positives = 75/88 (85%)
 Frame = +2

Query: 245 LVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAAEVMIKDGPDE 424
           L   LDH SVRRGYEVYKQVC ACHS+QYIA+RNLV VTHTE EAKAEA ++ +KDGPD+
Sbjct: 82  LFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGPDD 141

Query: 425 EGNYFERPGKLSDYLPSPYPNENAARAA 508
            GNY+ RPGKLSDY PSPYPNE AARAA
Sbjct: 142 TGNYYTRPGKLSDYFPSPYPNEEAARAA 169



 Score =  103 bits (248), Expect = 2e-22
 Identities = 47/65 (72%), Positives = 51/65 (78%)
 Frame = +1

Query: 481 PQ*KCGSCCNNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPG 660
           P  +     NNGAYPPDLS I S RKGGEDYIF+LLTGY + PAGVVLREGQ +NPY PG
Sbjct: 161 PNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHDAPAGVVLREGQYFNPYFPG 220

Query: 661 GAISM 675
           GAISM
Sbjct: 221 GAISM 225



 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 40/81 (49%)
 Frame = +3

Query: 9   ATVGRICGARLLKKYGLVWPQACQLSTNTQGWTKNRKVWLSTLXXXXXXXXALLFALEQS 188
           AT+ R  G RLLK    +  Q  +  ++   W    K  +  L        AL++ALEQS
Sbjct: 3   ATLRRFHGLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALEQS 62

Query: 189 VQASGSEAHPPHNPWNHSGWF 251
           VQASG E H P   WNH G F
Sbjct: 63  VQASGGEVHSPAQLWNHKGLF 83


>AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p
           protein.
          Length = 344

 Score =  135 bits (327), Expect = 5e-32
 Identities = 61/98 (62%), Positives = 74/98 (75%)
 Frame = +2

Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
           P  Q    + L+  LD  SVRRGY VYK+VC +CHSLQY+A+RNLV V  TE EAKAEA 
Sbjct: 75  PAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAE 134

Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
            + ++DGP+EEG Y+ERPGKLSD+ PSPY NE AAR+A
Sbjct: 135 AITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSA 172



 Score = 95.1 bits (226), Expect = 8e-20
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +1

Query: 508 NNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPGGAISMG 678
           NNG+YPPDLS I S RKGGEDY+F+LLTGY +PPAG  LR+G  +NPY  GGAI+MG
Sbjct: 173 NNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMG 229



 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 23/52 (44%), Positives = 27/52 (51%)
 Frame = +3

Query: 99  GWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFS 254
           G+T NRK+ L  L         L++ALE SV AS    HP H  WNH G  S
Sbjct: 37  GFTGNRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLS 87


>AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-PA
           protein.
          Length = 344

 Score =  135 bits (327), Expect = 5e-32
 Identities = 61/98 (62%), Positives = 74/98 (75%)
 Frame = +2

Query: 215 PTSQPLESQWLVQPLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNVTHTEDEAKAEAA 394
           P  Q    + L+  LD  SVRRGY VYK+VC +CHSLQY+A+RNLV V  TE EAKAEA 
Sbjct: 75  PAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAE 134

Query: 395 EVMIKDGPDEEGNYFERPGKLSDYLPSPYPNENAARAA 508
            + ++DGP+EEG Y+ERPGKLSD+ PSPY NE AAR+A
Sbjct: 135 AITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSA 172



 Score = 95.1 bits (226), Expect = 8e-20
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +1

Query: 508 NNGAYPPDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYXPGGAISMG 678
           NNG+YPPDLS I S RKGGEDY+F+LLTGY +PPAG  LR+G  +NPY  GGAI+MG
Sbjct: 173 NNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMG 229



 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 23/52 (44%), Positives = 27/52 (51%)
 Frame = +3

Query: 99  GWTKNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFS 254
           G+T NRK+ L  L         L++ALE SV AS    HP H  WNH G  S
Sbjct: 37  GFTGNRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLS 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,403,106
Number of Sequences: 53049
Number of extensions: 802960
Number of successful extensions: 2729
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)