Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060559.seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.2  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 350 LDEISVSRSXNDGXIVLASFE 288
           LDEI V  + ND    + SFE
Sbjct: 141 LDEIEVKVTGNDAPPPITSFE 161


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 598 TTQLLSLSWPFLGWHG 645
           T QLLSL   F GW G
Sbjct: 2   TIQLLSLICKFGGWMG 17


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 335 QRFHQEHDHRNLS 373
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 515 HFVTPTXELFDTEXESEQGM 456
           HF+TPT  L D E   + G+
Sbjct: 32  HFMTPTLLLRDVELIKQIGV 51


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 619 SWPFLGWHGDXHVGGFNQN 675
           SWPF    G  H GG   +
Sbjct: 164 SWPFNTMSGATHHGGIKSD 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,788
Number of Sequences: 336
Number of extensions: 2783
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)