Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060557.seq
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 309 DGNIVLASFELPESNIDCV 253
           DG+IV   F L E  + CV
Sbjct: 218 DGSIVFVCFSLVEDTLPCV 236


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 327 QRFHQEHDHRNLS 365
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 306 GNIVLASFELPESNIDCVP 250
           GNI +  + +P  NI+ +P
Sbjct: 151 GNIAMELWNMPRENIEPLP 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,823
Number of Sequences: 336
Number of extensions: 3543
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)