Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060549.seq
(687 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 227 6e-62
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 227 6e-62
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 220 9e-60
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 220 1e-59
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 1.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 3.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 4.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.3
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 227 bits (556), Expect = 6e-62
Identities = 110/139 (79%), Positives = 118/139 (84%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVA 616
NGQTREHALLAFTLGVKQLIVGVNK + +++ +++GYNPAAVA
Sbjct: 73 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVA 132
Query: 617 FVPISGWHGDNMLEPSTKM 673
FVPISGWHGDNMLE S+KM
Sbjct: 133 FVPISGWHGDNMLEVSSKM 151
Score = 28.3 bits (60), Expect = 0.072
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 223 WVLDKLKAERDR 258
WVLDKLKAER+R
Sbjct: 1 WVLDKLKAERER 12
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 227 bits (556), Expect = 6e-62
Identities = 110/139 (79%), Positives = 118/139 (84%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVA 616
NGQTREHALLAFTLGVKQLIVGVNK + +++ +++GYNPAAVA
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVA 189
Query: 617 FVPISGWHGDNMLEPSTKM 673
FVPISGWHGDNMLE S+KM
Sbjct: 190 FVPISGWHGDNMLEVSSKM 208
Score = 146 bits (354), Expect = 2e-37
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERDR 258
DKLKAER+R
Sbjct: 61 DKLKAERER 69
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 220 bits (538), Expect = 9e-60
Identities = 106/138 (76%), Positives = 116/138 (84%)
Frame = +2
Query: 257 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 436
GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISK 129
Query: 437 NGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVA 616
NGQTREHALLAFTLGVKQLIVGVNK + + +++ +++GYN A+VA
Sbjct: 130 NGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVA 189
Query: 617 FVPISGWHGDNMLEPSTK 670
FVPISGWHGDNMLEPS K
Sbjct: 190 FVPISGWHGDNMLEPSPK 207
Score = 146 bits (354), Expect = 2e-37
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +1
Query: 52 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 231
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 232 DKLKAERDR 258
DKLKAER+R
Sbjct: 61 DKLKAERER 69
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 220 bits (537), Expect = 1e-59
Identities = 106/135 (78%), Positives = 114/135 (84%)
Frame = +2
Query: 269 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 448
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 449 REHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVPI 628
REHALLAFTLGVKQLIVGVNK + +++ +++GYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 629 SGWHGDNMLEPSTKM 673
SGWHGDNMLE S+KM
Sbjct: 121 SGWHGDNMLEVSSKM 135
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 308 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.51
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 64 KTHINIVVIGHVDSGKST 117
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 73 INIVVIGHVDSGKST 117
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 641 RAIQKWARKRQQLGCSPIFLMYEDTSFLISSNLGS 537
+A +KWA + C L +DT ++ +LGS
Sbjct: 652 QAFRKWAADTFAVACETFCLDDDDTLLEVALSLGS 686
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 65 FSLPIFG*SRITNCV*Y 15
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 293 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 394
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 293 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 394
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 260 YRSRSAFSLSNTQAYLKDPLPISWASFSN 174
Y +RS F L N +KD L ++ F+N
Sbjct: 76 YATRSPFLLLNDPELIKDILIRDFSKFAN 104
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 307 IVLASFELPESNIDCDTDHAQPLVCPIPKHI*RILY 200
IV+ FE+ +S D + A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
Score = 21.4 bits (43), Expect = 8.3
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = -3
Query: 532 MVVQWNPFVYSYDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDH 353
M V ++ + S+ E +T+ G+ + T+ D EF +S + +
Sbjct: 329 MEVPYSGTLISHYEDGETKSRFISGIRSEQTIF-DVKPEFGSIYFLGNYSLVPTTTASPT 387
Query: 352 VLDEISVSRSINDGNI---VLASFELPESNIDCDTDHAQPLVCPIPK 221
+ S +I+ +I V+ L E N+D + DH + ++ P PK
Sbjct: 388 TEPSTTTSTTISQKHIKVFVVNKDILHEHNVDDNEDHDENMIIP-PK 433
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 487 TAHRRSKQMDSTEPPYSEPRFEEIKKEV 570
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 670 FG*RLQHVVSVPSRNGHESDSSWV 599
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 512 WIPLNHHTVSPDLRKSRRKY 571
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,315
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 35
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -