Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060544.seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   2.9  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   2.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.0  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 479 LWCKWREALRKXLYADIDAAW 541
           LW  W E L+  L   +DA W
Sbjct: 390 LWLSWEEGLQHFLKYLLDADW 410


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 362 SIWTATNKETGYLVAPRRSGVEAFDVF 282
           +IW A     G  V P+ +GV+  D+F
Sbjct: 5   TIWVAAALALGLTVLPQVTGVKHVDIF 31


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 221  PVSSGVNAYVGSGGRNANLAAIFPGHGGQQN 129
            P S   N  +G GG N   ++     GG+Q+
Sbjct: 1160 PGSRSYNGQMGGGGANRKRSSATNNGGGRQS 1190


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 438 CLILNKNCSFVRDPQRC 388
           C  L K C + + P+RC
Sbjct: 180 CSALLKACRYAKQPERC 196


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 438 CLILNKNCSFVRDPQRC 388
           C  L K C + + P+RC
Sbjct: 180 CSALLKACRYAKQPERC 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,526
Number of Sequences: 2352
Number of extensions: 9580
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)