Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060544.seq
         (558 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g30380.1 68416.m03835 expressed protein ; expression supporte...    61   6e-10
At1g32190.1 68414.m03959 expressed protein                             59   2e-09
At4g31020.2 68417.m04406 expressed protein                             58   3e-09
At4g31020.1 68417.m04405 expressed protein                             58   3e-09
At3g01690.1 68416.m00101 expressed protein                             57   7e-09
At5g14390.1 68418.m01681 expressed protein                             56   2e-08
At1g13610.1 68414.m01597 expressed protein ; expression supporte...    56   2e-08
At5g38220.2 68418.m04607 expressed protein                             54   5e-08
At5g38220.1 68418.m04608 expressed protein                             54   5e-08
At4g24760.1 68417.m03545 expressed protein                             52   3e-07
At2g24320.1 68415.m02907 hypothetical protein                          52   3e-07
At1g66900.1 68414.m07603 expressed protein                             49   2e-06
At4g33380.1 68417.m04745 expressed protein                             27   8.5  
At3g63320.1 68416.m07123 protein phosphatase 2C-related / PP2C-r...    27   8.5  
At3g44900.1 68416.m04837 cation/hydrogen exchanger, putative (CH...    27   8.5  

>At3g30380.1 68416.m03835 expressed protein ; expression supported
           by MPSS
          Length = 399

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 29/81 (35%), Positives = 43/81 (53%)
 Frame = +3

Query: 270 EREKENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRIN 449
           E  KEN+E    +T RGN++   +++ +P A  T+L+SHGNA DLGQM   +  L   + 
Sbjct: 37  ENVKENVEVLKLKTKRGNQVVAAYIK-NPTASLTLLYSHGNAADLGQMFELFSELSLHLR 95

Query: 450 CNIFXXXXXXXXXXXXKPSER 512
            N+             KPSE+
Sbjct: 96  VNLIGYDYSGYGRSSGKPSEQ 116



 Score = 27.9 bits (59), Expect = 4.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 157 IAAKLAFLPPEPTYAFTPDETGSKFSLTLTERASGNTQNVKKKTSKAS 300
           +AAK AF PP P  ++  +    K  L   E    N + +K KT + +
Sbjct: 8   MAAKFAFFPPNPP-SYGVEVVEGKLRLIGVENVKENVEVLKLKTKRGN 54


>At1g32190.1 68414.m03959 expressed protein
          Length = 422

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = +3

Query: 306 RTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXX 485
           +T RGNK+   ++R +PNAR T+L+SHGNA DLGQ+   ++ L   +  N+         
Sbjct: 59  KTRRGNKVTAFYLR-NPNARLTLLYSHGNAADLGQLFDLFVQLKVNLRVNLMGYDYSGYG 117

Query: 486 XXXXKPSE 509
               KPSE
Sbjct: 118 ASTGKPSE 125



 Score = 27.1 bits (57), Expect = 8.5
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 157 IAAKLAFLPPE-PTYAFTPDETGSKFSLTLTERASGNT 267
           +AAK AF PP  PTY  T    G K S   +  +S +T
Sbjct: 8   LAAKFAFFPPSPPTYHLTKTPDG-KLSAVSSASSSSST 44


>At4g31020.2 68417.m04406 expressed protein
          Length = 294

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 31/76 (40%), Positives = 39/76 (51%)
 Frame = +3

Query: 282 ENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 461
           +N+E     T  GNK+   F R  P ARFT+L+SHGNA DLGQM   ++ L   +  NI 
Sbjct: 42  KNVEVHQLTTKSGNKVVATFWR-HPFARFTLLYSHGNAADLGQMVELFIELRAHLRVNIM 100

Query: 462 XXXXXXXXXXXXKPSE 509
                       KPSE
Sbjct: 101 SYDYSGYGASTGKPSE 116



 Score = 31.1 bits (67), Expect = 0.52
 Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 157 IAAKLAFLPPEP-TYAFT-PDETG 222
           +AAK AF PPEP TY  T  DETG
Sbjct: 8   VAAKFAFFPPEPATYGVTKDDETG 31


>At4g31020.1 68417.m04405 expressed protein
          Length = 294

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 31/76 (40%), Positives = 39/76 (51%)
 Frame = +3

Query: 282 ENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 461
           +N+E     T  GNK+   F R  P ARFT+L+SHGNA DLGQM   ++ L   +  NI 
Sbjct: 42  KNVEVHQLTTKSGNKVVATFWR-HPFARFTLLYSHGNAADLGQMVELFIELRAHLRVNIM 100

Query: 462 XXXXXXXXXXXXKPSE 509
                       KPSE
Sbjct: 101 SYDYSGYGASTGKPSE 116



 Score = 31.1 bits (67), Expect = 0.52
 Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 157 IAAKLAFLPPEP-TYAFT-PDETG 222
           +AAK AF PPEP TY  T  DETG
Sbjct: 8   VAAKFAFFPPEPATYGVTKDDETG 31


>At3g01690.1 68416.m00101 expressed protein
          Length = 361

 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 30/77 (38%), Positives = 41/77 (53%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +EN+E    RT RG +I  ++VR  P A  T+L+SHGNA DLGQM   ++ L   +  N+
Sbjct: 41  RENVEIVKLRTRRGTEIVGMYVR-HPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNL 99

Query: 459 FXXXXXXXXXXXXKPSE 509
                        KPSE
Sbjct: 100 MGYDYSGYGQSTGKPSE 116


>At5g14390.1 68418.m01681 expressed protein
          Length = 369

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 29/77 (37%), Positives = 40/77 (51%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +EN+E     T RG +I  ++VR  P A  T+L+SHGNA DLGQM   ++ L   +  N+
Sbjct: 41  RENVEILKLPTRRGTEIVAMYVR-HPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNL 99

Query: 459 FXXXXXXXXXXXXKPSE 509
                        KPSE
Sbjct: 100 MGYDYSGYGQSTGKPSE 116


>At1g13610.1 68414.m01597 expressed protein ; expression supported
           by MPSS
          Length = 351

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 31/77 (40%), Positives = 44/77 (57%)
 Frame = +3

Query: 282 ENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIF 461
           ENIE    RT RGN+I  ++V+ +P A+ T+LFSHGNA DL Q+  + L    ++N N+ 
Sbjct: 39  ENIEVVKIRTKRGNEIVAMYVK-NPTAKLTVLFSHGNASDLAQI-FYILAELIQLNVNLM 96

Query: 462 XXXXXXXXXXXXKPSER 512
                       KPSE+
Sbjct: 97  GYDYSGYGQSSGKPSEQ 113



 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 157 IAAKLAFLPPE-PTYAFTPDETGSKFSLT 240
           +AAKLAF PP  P+Y    +E+  K  ++
Sbjct: 1   MAAKLAFFPPNPPSYTVVTEESTGKMMIS 29


>At5g38220.2 68418.m04607 expressed protein
          Length = 238

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 25/77 (32%), Positives = 42/77 (54%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +++++    +T RGN+I  ++++  P A  T+L+SHGNA DLGQM   ++ L  R+  N+
Sbjct: 39  RDDVDVLKLKTRRGNEIVAIYIK-HPKANGTLLYSHGNAADLGQMFELFIELSNRLRLNL 97

Query: 459 FXXXXXXXXXXXXKPSE 509
                        K SE
Sbjct: 98  MGYDYSGYGQSTGKASE 114


>At5g38220.1 68418.m04608 expressed protein
          Length = 336

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 25/77 (32%), Positives = 42/77 (54%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +++++    +T RGN+I  ++++  P A  T+L+SHGNA DLGQM   ++ L  R+  N+
Sbjct: 39  RDDVDVLKLKTRRGNEIVAIYIK-HPKANGTLLYSHGNAADLGQMFELFIELSNRLRLNL 97

Query: 459 FXXXXXXXXXXXXKPSE 509
                        K SE
Sbjct: 98  MGYDYSGYGQSTGKASE 114


>At4g24760.1 68417.m03545 expressed protein
          Length = 365

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 25/78 (32%), Positives = 41/78 (52%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +EN++     T RG +I  +++R  P A  T+L+SHGNA D+GQM   ++ L   +  N+
Sbjct: 41  RENVDILRLPTRRGTEIVAMYIRY-PMAVTTLLYSHGNAADIGQMYELFIELSIHLRVNL 99

Query: 459 FXXXXXXXXXXXXKPSER 512
                        KP+E+
Sbjct: 100 MGYDYSGYGQSSGKPTEQ 117



 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 157 IAAKLAFLPPE-PTYAFTPDETGSKFSLT 240
           +AAKLAF PP  P+Y    DET   F ++
Sbjct: 8   MAAKLAFFPPNPPSYKLVRDETTELFLMS 36


>At2g24320.1 68415.m02907 hypothetical protein
          Length = 286

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 26/67 (38%), Positives = 35/67 (52%)
 Frame = +3

Query: 309 TXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNIFXXXXXXXXX 488
           T  GNK+   F +  P +RFT+L+SHGNA DLGQM   ++ L   +  NI          
Sbjct: 43  TKSGNKVIATFWK-HPFSRFTLLYSHGNAADLGQMVDLFIELRAHLRVNIMSYDYSGYGA 101

Query: 489 XXXKPSE 509
              KP+E
Sbjct: 102 STGKPTE 108



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 157 IAAKLAFLPPEPTYAFTPDETGSKFSLT-LTERASGNTQNVKKKT 288
           +AAK AF PP PTY    DE   K   T +T   S +   +  K+
Sbjct: 1   MAAKFAFFPPPPTYDVGKDEETGKLMFTGITPEKSMDVHQLTTKS 45


>At1g66900.1 68414.m07603 expressed protein
          Length = 272

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 23/60 (38%), Positives = 38/60 (63%)
 Frame = +3

Query: 279 KENIEGFYSRTXRGNKIACLFVRCSPNARFTILFSHGNAVDLGQMSSFYLGLGTRINCNI 458
           +++++    RT  GN+I  ++V+ S  A  T+L+SHGNA DLGQM   ++ L  R+  N+
Sbjct: 42  RDDVDILKLRTRCGNEIVAVYVKHS-KANGTLLYSHGNAADLGQMFELFVELSNRLRVNL 100


>At4g33380.1 68417.m04745 expressed protein
          Length = 328

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 225 EIFFNAHRTREWQYSEREKENIEGFYSRTXRGN 323
           +I+ + H+    +Y+E+ K+N +  YS T R N
Sbjct: 279 DIYEHKHQECWLKYAEKPKQNFKDRYSETYRNN 311


>At3g63320.1 68416.m07123 protein phosphatase 2C-related /
           PP2C-related protein phosphatase 2C - Rattus norvegicus,
           EMBL:AF095927
          Length = 423

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 167 LAAIFPGHGGQQ-NRQQSSLKLNPFILFRYCL*TLVFTK 54
           +AA+F GH G + +   S L L+ F L  Y L    F+K
Sbjct: 69  IAAVFDGHSGSEASEMASQLLLDYFALHIYFLLDATFSK 107


>At3g44900.1 68416.m04837 cation/hydrogen exchanger, putative (CHX4)
           monovalent cation:proton antiporter family 2 (CPA2)
           member, PMID:11500563
          Length = 817

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 IKFQRTLLPVLLSAMPRKNCGQVSISAS 185
           +KF  T LP  L  MP K+C  +S+  S
Sbjct: 397 VKFALTTLPAFLYGMPAKDCIALSLIMS 424


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,665,213
Number of Sequences: 28952
Number of extensions: 196693
Number of successful extensions: 519
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)