Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060541.seq
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64; Euk... 165 1e-39
UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella ve... 127 2e-28
UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1; Di... 118 1e-25
UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like; ... 118 1e-25
UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|R... 104 2e-21
UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, who... 101 2e-20
UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3; Dik... 98 2e-19
UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene pr... 93 8e-18
UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 91 2e-17
UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17; Di... 85 2e-15
UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2; Cryptosporid... 81 3e-14
UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 80 6e-14
UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=... 79 1e-13
UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n... 78 2e-13
UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 68 2e-10
UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 66 1e-09
UniRef50_Q4T683 Cluster: Chromosome undetermined SCAF8882, whole... 65 2e-09
UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n... 62 9e-09
UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=... 48 2e-04
UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Ere... 48 2e-04
UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosom... 45 0.001
UniRef50_Q3LWA3 Cluster: Splicing factor 3b; n=1; Bigelowiella n... 44 0.003
UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yar... 44 0.005
UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep... 43 0.006
UniRef50_Q57XR8 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.042
UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1; ... 40 0.042
UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Klu... 39 0.13
UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.17
UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 38 0.23
UniRef50_O77380 Cluster: Putative uncharacterized protein MAL3P6... 38 0.30
UniRef50_UPI0000DA4330 Cluster: PREDICTED: similar to splicing f... 37 0.40
UniRef50_Q8Y894 Cluster: Lmo1020 protein; n=13; Listeria|Rep: Lm... 36 1.2
UniRef50_Q07SX1 Cluster: Heme peroxidase; n=3; Rhodopseudomonas ... 35 2.1
UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza sativa... 35 2.1
UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 34 2.8
UniRef50_Q687X5-2 Cluster: Isoform 2 of Q687X5 ; n=2; Homo/Pan/G... 34 3.7
UniRef50_Q687X5 Cluster: Metalloreductase STEAP4; n=32; Euteleos... 34 3.7
UniRef50_Q16531 Cluster: DNA damage-binding protein 1; n=44; cel... 34 3.7
UniRef50_Q4UGI4 Cluster: Damage-specific DNA binding protein 1, ... 33 4.9
UniRef50_Q7NC21 Cluster: Elongation factor Ts; n=2; Mycoplasma g... 33 8.5
>UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64;
Eukaryota|Rep: Splicing factor 3B subunit 3 - Homo
sapiens (Human)
Length = 1217
Score = 165 bits (400), Expect = 1e-39
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 1082 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 1141
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 1142 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1201
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 1202 PEVSKKLEDIRTRYA 1216
Score = 134 bits (325), Expect = 1e-30
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 998 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 1057
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 1058 LPPNTNDEVDEDPTGNKALWDRGLL 1082
>UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1171
Score = 127 bits (307), Expect = 2e-28
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I VSD+QES VK+K R+NQL++FADD NPRW+T C LDYDT+A +DKFGN+ +RLP
Sbjct: 970 IVVSDIQESFHFVKYKPRDNQLVVFADDVNPRWLTCCCYLDYDTLAGADKFGNIFTVRLP 1029
Query: 190 QSVSDDVDEDPTGNKALWDRGFL 258
SDDVDEDPTG KA WDRG L
Sbjct: 1030 SGSSDDVDEDPTGTKAFWDRGLL 1052
Score = 113 bits (273), Expect = 3e-24
Identities = 69/135 (51%), Positives = 85/135 (62%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGA QK + + N+ VGETV SLQ+ATLIPGGSE+L++ T+SG +G+L+PFTSRED DFF
Sbjct: 1052 LNGAQQKLETMCNYFVGETVLSLQKATLIPGGSESLVFTTLSGGVGMLVPFTSREDIDFF 1111
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QHLEMH+RSE L D L E Y NSL ++ + P
Sbjct: 1112 QHLEMHLRSEQPSLSVVDG------------DLCEHY-NSL---DYSKRRTIAEELDRTP 1155
Query: 615 PKYQKKLEDIRTRYA 659
+ KKLEDIRTRYA
Sbjct: 1156 AEVSKKLEDIRTRYA 1170
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 515 PVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
P +V+DGDLCE +NSLD K++ IA +L+RTPAEVSKK
Sbjct: 1123 PSLSVVDGDLCEHYNSLDYSKRRTIAEELDRTPAEVSKK 1161
>UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: CPSF domain-containing
protein - Dictyostelium discoideum AX4
Length = 1256
Score = 118 bits (285), Expect = 1e-25
Identities = 53/85 (62%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGA K D + NF VG+TVT+L + +L+ GG E +LY TISG++G L+PFTSRED DFF
Sbjct: 1121 LNGAPHKLDHIANFFVGDTVTTLNKTSLVVGGPEVILYTTISGAIGALIPFTSREDVDFF 1180
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSY 509
LEM+MRS+ PLCGRDHL++RSY
Sbjct: 1181 STLEMNMRSDCLPLCGRDHLAYRSY 1205
Score = 107 bits (258), Expect = 2e-22
Identities = 47/98 (47%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
+ V D+QES+ +K+K+ EN L +FADD PRW+T+S +LDYDT+A +DKFGN+ ++RLP
Sbjct: 1039 LVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNIFVLRLP 1098
Query: 190 QSVSDDVDEDPTGNKALWDRGFLM-VLHKREMLWSIFM 300
+SD+V+EDPTG K ++ G L HK + + + F+
Sbjct: 1099 LLISDEVEEDPTGTKLKFESGTLNGAPHKLDHIANFFV 1136
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y+PVKN+IDGDLCEQF++L+ KQ +I+ +L R+P+EV KK
Sbjct: 1206 YFPVKNIIDGDLCEQFSTLNYQKQLSISEELSRSPSEVIKK 1246
>UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like;
n=1; Medicago truncatula|Rep: CPSF A subunit,
C-terminal; WD40-like - Medicago truncatula (Barrel
medic)
Length = 632
Score = 118 bits (284), Expect = 1e-25
Identities = 50/84 (59%), Positives = 65/84 (77%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGA K + +V FHVG+ ++ LQ+A+LIPGG E +L T+ GS+G L FTSR+D DFF
Sbjct: 500 LNGAPNKVEEIVQFHVGDVISCLQKASLIPGGGECILNGTVMGSIGALHAFTSRDDVDFF 559
Query: 435 QHLEMHMRSENSPLCGRDHLSFRS 506
HLEMHMR +N PLCGRDH+++RS
Sbjct: 560 SHLEMHMRQDNPPLCGRDHMAYRS 583
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +1
Query: 1 RHEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNV 171
R I+V D QES K++ ENQL IFADD PRW+T S +D+DT+A G +
Sbjct: 437 RDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAEDPTGGRI 493
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y+PVK+VIDGDLCEQF +L Q+ IA +L+RT E+ KK
Sbjct: 585 YFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTRGEILKK 625
>UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1196
Score = 104 bits (249), Expect = 2e-21
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I+V DVQES+ VK+K E + IFADDT PR+IT + LDYDT+A +DKFGN+ + RLP
Sbjct: 980 IYVGDVQESIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTLAGADKFGNIFVNRLP 1039
Query: 190 QSVSDDVDEDPTGNKALWDRGFL 258
+ VS+D+D+DPTG K ++ +G L
Sbjct: 1040 KDVSEDMDDDPTGGKNIYSQGVL 1062
Score = 100 bits (239), Expect = 4e-20
Identities = 44/88 (50%), Positives = 58/88 (65%)
Frame = +3
Query: 246 QRFLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDH 425
Q LNGA K + ++GETV +L + L PGG E ++Y T G +G LLPF+SR +
Sbjct: 1059 QGVLNGAPNKSETSAQTYIGETVCALTKGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEI 1118
Query: 426 DFFQHLEMHMRSENSPLCGRDHLSFRSY 509
+FF HLEMHMR E + GRDH++FRSY
Sbjct: 1119 EFFTHLEMHMRQEAPSIVGRDHMAFRSY 1146
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 497 F*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
F Y PVKNVIDGDLCEQF +L Q+ IA +++RTP E+ KK
Sbjct: 1143 FRSYYAPVKNVIDGDLCEQFGALPADVQRRIAEEMDRTPGEILKK 1187
>UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1178
Score = 101 bits (241), Expect = 2e-20
Identities = 46/95 (48%), Positives = 63/95 (66%)
Frame = +3
Query: 222 YWKQSTLGQRFLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLL 401
Y + + Q +NGA K D + NF+VGE +TSLQ+ L+ SE ++Y T GS+ L
Sbjct: 1033 YEYKMKMDQGCMNGAPFKMDQICNFYVGEVITSLQKIALVSTSSEVVVYGTSMGSIAALY 1092
Query: 402 PFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRS 506
PF ++ED DFF HLEM++R E+ PL GRDH+ FRS
Sbjct: 1093 PFDNKEDIDFFLHLEMYLRVEHQPLSGRDHMQFRS 1127
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I+V++V +S+ +++ R+ + ADD PR++T S +LDY T+ DKF N+ + R+P
Sbjct: 962 IYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDKFENIFVSRVP 1021
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ ++ +E P K D+G
Sbjct: 1022 LDIDEEQEEHPYEYKMKMDQG 1042
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +2
Query: 497 F*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
F Y P K++IDGDLC+QF ++ KQ+A+A + +RTPA++ KK
Sbjct: 1125 FRSAYGPCKSIIDGDLCDQFGNMQYNKQRAVAEEFDRTPADIIKK 1169
>UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3;
Dikarya|Rep: Pre-mRNA-splicing factor RSE1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1217
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = +1
Query: 10 IFVSDVQESVF-CVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRL 186
I V D+QES F CV QL+IFADD+ PRWIT +DY+T+A DKFGN+ I RL
Sbjct: 999 IIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRL 1058
Query: 187 PQSVSDDVDEDPTGNKALWDRGFLM-VLHKREML 285
S+S+ VD+DPTG L ++ FLM HK EM+
Sbjct: 1059 DPSISEKVDDDPTGATILHEKSFLMGAAHKTEMI 1092
Score = 93.5 bits (222), Expect = 4e-18
Identities = 38/86 (44%), Positives = 62/86 (72%)
Frame = +3
Query: 252 FLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDF 431
FL GA+ K +++ ++++G VTS+ + L+ GG + L+Y TISG++G L+PF S +D +F
Sbjct: 1081 FLMGAAHKTEMIGHYNIGSVVTSITKIPLVAGGRDVLVYTTISGAVGALVPFVSSDDIEF 1140
Query: 432 FQHLEMHMRSENSPLCGRDHLSFRSY 509
LEMHMR+++ L GRDH+++R Y
Sbjct: 1141 MSTLEMHMRTQDISLVGRDHIAYRGY 1166
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y P+K V+DGDLCE F+ L KQ+AIA DL+R+ +V KK
Sbjct: 1167 YVPIKGVVDGDLCESFSLLPYPKQQAIALDLDRSVGDVLKK 1207
>UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene
product; n=10; Plasmodium|Rep: Drosophila melanogaster
CG13900 gene product - Plasmodium yoelii yoelii
Length = 1235
Score = 92.7 bits (220), Expect = 8e-18
Identities = 45/129 (34%), Positives = 76/129 (58%)
Frame = +3
Query: 267 SQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 446
++K + +++FH+GE VTSLQ+ L P SE ++Y+TI G++G +P+ S+E+ + QHLE
Sbjct: 1105 NRKMEHIMSFHIGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQHLE 1164
Query: 447 MHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLPPKYQ 626
+ +R+E LCGR+H+ FRSY + + + E ++ P +
Sbjct: 1165 IILRTEKHSLCGREHIFFRSYYHPVQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDEIL 1224
Query: 627 KKLEDIRTR 653
+KLEDIR +
Sbjct: 1225 RKLEDIRNK 1233
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRL 186
IF SD++ESV + +N + + +DD PRWIT S ILD+ TI +DKF +V I+R+
Sbjct: 1005 IFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHTIIAADKFDSVFILRV 1063
>UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Plasmodium falciparum 3D7|Rep: Splicing
factor 3b, subunit 3, 130kD, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1329
Score = 91.5 bits (217), Expect = 2e-17
Identities = 36/81 (44%), Positives = 61/81 (75%)
Frame = +3
Query: 267 SQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 446
++K + +++FH+GE VTS+Q+ L P SE ++Y+TI G++G +P+ ++E+ + QHLE
Sbjct: 1199 NRKLEHMMSFHIGEIVTSMQKVRLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE 1258
Query: 447 MHMRSENSPLCGRDHLSFRSY 509
+ +R+E PLCGR+H+ FRSY
Sbjct: 1259 IILRTEKPPLCGREHIFFRSY 1279
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
+ IF D++ESV + +N L + +DD PRWIT S ILD+ TI +DKF +V I+R
Sbjct: 1111 NRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILDHHTIMAADKFDSVFILR 1170
Query: 184 LPQSVSDD 207
+P+ D
Sbjct: 1171 VPEEAKQD 1178
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +2
Query: 497 F*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
F Y+PV+NV+DGDLCEQF+SL QK IA DLERTP ++ +K
Sbjct: 1276 FRSYYHPVQNVVDGDLCEQFSSLSYDAQKKIANDLERTPEDILRK 1320
>UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17;
Dikarya|Rep: Pre-mRNA-splicing factor rse1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1206
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +3
Query: 252 FLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDF 431
FLN K D++ +F + TSLQ+ L+ G E LL+ + G++GV PF ++ED F
Sbjct: 1071 FLNSTPHKLDLMAHFFTNDIPTSLQKVQLVEGAREVLLWTGLLGTVGVFTPFINQEDVRF 1130
Query: 432 FQHLEMHMRSENSPLCGRDHLSFRSY 509
FQ LE +R E PL GRDHL++RSY
Sbjct: 1131 FQQLEFLLRKECPPLAGRDHLAYRSY 1156
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V+D Q SV V +K +N L+ FADDT RW T + ++DYDT+A DKFGN+ ++R P
Sbjct: 990 IVVADSQYSVRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDKFGNIWLLRCP 1049
Query: 190 QSVSDDVDEDPTGNKALWDRGFL-MVLHKREMLWSIF 297
+ VS DE+ + +K + ++ FL HK +++ F
Sbjct: 1050 EHVSKLADEENSESKLIHEKPFLNSTPHKLDLMAHFF 1086
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y PVK VIDGDLCE + SL Q+ IA +L+RT AEVSKK
Sbjct: 1157 YAPVKCVIDGDLCEMYYSLPHPVQEMIANELDRTIAEVSKK 1197
>UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 979
Score = 83.8 bits (198), Expect = 3e-15
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
L+GA + + +FH + T + + L+ GG E L+++ G++GV +PF +RED DFF
Sbjct: 761 LHGAPHRLQLTAHFHTQDIPTGITKTHLVVGGQEVLVWSGFQGTVGVFVPFVTREDADFF 820
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSY 509
LE HMR E L GRDHL++R Y
Sbjct: 821 LALEQHMRGEEPSLIGRDHLAYRGY 845
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
+ I V DVQ V V ++ NQLI F DDT RW T + ++DYD++A DKFGN I+R
Sbjct: 678 NRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIARWTTCTTMVDYDSVAGGDKFGNFWIVR 737
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
PQ S + DE P ++ L R L
Sbjct: 738 TPQQASLEADE-PGAHRLLHAREHL 761
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y P K V+DGDLCE++ L K++ IA +L+R+ EV +K
Sbjct: 846 YEPAKGVVDGDLCERYQLLPGDKKQRIAAELDRSVREVERK 886
>UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1273
Score = 83.8 bits (198), Expect = 3e-15
Identities = 34/86 (39%), Positives = 54/86 (62%)
Frame = +3
Query: 252 FLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDF 431
+L G + + D V ++ + S+Q+ L+ G + +A + G+LG L+PF SR H
Sbjct: 1107 YLGGTANRLDSVAHYFANDIPISIQKTHLLSGAERIIFWAGLQGTLGALIPFNSRRQHKM 1166
Query: 432 FQHLEMHMRSENSPLCGRDHLSFRSY 509
FQ LE+ +RS++ P+ GRDHL+FRSY
Sbjct: 1167 FQQLELQLRSDDKPMSGRDHLAFRSY 1192
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKR--ENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
+ VSD +SV V HK + N++I F DDT R T + +LDYDT DKFGN+ ++R
Sbjct: 1024 LVVSDSVQSVTYVVHKDQIHPNRMIPFIDDTIQRHTTCTEMLDYDTTVGGDKFGNLWLVR 1083
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
PQ VS+ DE P G+ L D+ +L
Sbjct: 1084 CPQKVSESSDESPDGSDILVDKSYL 1108
Score = 32.7 bits (71), Expect = 8.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 497 F*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDL 601
F + PVK+VIDGDL E+F L K+++I L
Sbjct: 1189 FRSYFNPVKSVIDGDLIERFLVLSRDKRESIVGQL 1223
>UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2;
Cryptosporidium|Rep: CG13900 gene product -
Cryptosporidium hominis
Length = 1318
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Frame = +3
Query: 279 DVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMR 458
+ V FH+G+ VT LQ++ L P +EA++Y T+ GS+G L P + ED + LE+ +R
Sbjct: 1192 NTVAQFHLGDIVTCLQKSQLTPTSAEAIIYGTVLGSIGSLSPILNNEDIELLSKLEILLR 1251
Query: 459 SENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVI--WNVLPPKYQKK 632
+ S L RDHL FRSY + + + + T L++K S + +V + KK
Sbjct: 1252 KQKSTLLSRDHLMFRSYYSPVHNVIDGDFCQTFT--ILDSKIQSEIASKLDVTVEEIYKK 1309
Query: 633 LEDIRTR 653
L+D +TR
Sbjct: 1310 LDDYKTR 1316
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSC-ILDYDTIAVSDKFGNVAIMRL 186
IF D+ V K NQ I+ A D PRW+T++C +LDY TIAVSDKF N+ + R+
Sbjct: 1101 IFAGDISNGVLVFKFNNTSNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRV 1160
Query: 187 PQSVSDD 207
P SDD
Sbjct: 1161 PVEASDD 1167
>UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Babesia bovis|Rep: Splicing factor 3b,
subunit 3, 130kD, putative - Babesia bovis
Length = 1169
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +3
Query: 285 VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 464
V FH+G+ T++ +A L + +LY T+ GS+G L+PF S+++ DF QHLEM M +E
Sbjct: 1046 VCQFHLGDLPTAMDKAALSQS-THVVLYGTVMGSIGALVPFQSKDELDFLQHLEMLMATE 1104
Query: 465 NSPLCGRDHLSFRSY 509
PLCGR+H +RSY
Sbjct: 1105 APPLCGREHSFYRSY 1119
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIF---ADDTNPRWITNSCILDYDTIAVSDKFGNVAIM 180
IF D++E + ++ K + F T PRW+T+ LDY T+ DKF ++ +
Sbjct: 971 IFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGDKFDSIFVT 1030
Query: 181 RLPQSVS 201
R+PQ S
Sbjct: 1031 RVPQEES 1037
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y PV+ V+DGDLCEQF L +Q+ +A L+ T V +K
Sbjct: 1120 YVPVQQVVDGDLCEQFRHLTEAQQRKVAQQLDTTVNNVLRK 1160
>UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1231
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +3
Query: 294 FHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 473
FH+G+ VTSLQR + P SE +LY T+ GS+GVL+PF S+++ DF QHLEM + ++
Sbjct: 1111 FHLGDIVTSLQRVRINPIHSEVVLYTTLMGSIGVLIPFVSKDELDFLQHLEMLLCNQIDT 1170
Query: 474 LCGRDHLSFRSY 509
+ GR+ FRSY
Sbjct: 1171 VTGREVQMFRSY 1182
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 494 IF*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
+F Y+PV+N++DGDLCE F +L K +A L AEV KK
Sbjct: 1178 MFRSYYFPVQNIVDGDLCEMFTALGDEKFN-VANQLNLKVAEVVKK 1222
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIF---ADDTNPRWITNSCILDYDTIAVSDKFGNVAIM 180
I+ D++ESV ++ K L F T PRW++ +LDY T+ DKF ++ +
Sbjct: 1032 IYCGDIRESVQLLRLKFYGEDLGEFELTTTSTGPRWLSTMELLDYSTVIAGDKFDSLFVS 1091
Query: 181 RLPQS 195
R+P +
Sbjct: 1092 RVPHN 1096
>UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1145
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +3
Query: 261 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 440
G+S K F VG+ TS + +LIPG LY+ G L L+P S+ D DF+QH
Sbjct: 1012 GSSYKMVTATQFFVGDIATSFAQCSLIPGAPSIFLYSNFMGGLSALIPLQSQNDIDFYQH 1071
Query: 441 LEMHMRSENSPLCGRDHLSFRS 506
LEMHMR + L R+H+SFRS
Sbjct: 1072 LEMHMRVHWTNLTDRNHISFRS 1093
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I ++ V + +++ + ++ I+AD PRW+ + L+ T+ SDKFG + + +LP
Sbjct: 930 ILLTGVSDGFNLIRYNQINHKFDIYADSL-PRWVVTAAPLNQSTVLASDKFGEIFMYQLP 988
Query: 190 QSVSD 204
+ + +
Sbjct: 989 KEIEE 993
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 515 PVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
PVK+ +DGDLCE + L Q+ IA ++E+ E+ KK
Sbjct: 1097 PVKDTVDGDLCELYERLPYEIQQEIAEEMEKEVNEIIKK 1135
>UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n=1;
Theileria annulata|Rep: Splicing factor 3b subunit,
putative - Theileria annulata
Length = 1340
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +3
Query: 294 FHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 473
FH+G+ VTS QR + P SE +LY T+ GS+GVL+PF S+++ DF QHLEM M ++
Sbjct: 1221 FHLGDIVTSFQRVRINPIHSEVVLYTTLMGSIGVLVPFVSKDELDFLQHLEMLMCNQIDT 1280
Query: 474 LCGRDHLSFRSY 509
+ GR+ FRSY
Sbjct: 1281 VTGREVQMFRSY 1292
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIF---ADDTNPRWITNSCILDYDTIAVSDKFGNVAIM 180
I+ D++ESV ++ K L F T PRW+++ +LDY T+ DKF ++ +
Sbjct: 1142 IYCGDIRESVQLLRIKFYGEDLGEFELTTTSTGPRWLSSMELLDYSTVIAGDKFDSIFVS 1201
Query: 181 RLPQS 195
R+P +
Sbjct: 1202 RVPHN 1206
Score = 39.1 bits (87), Expect = 0.098
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 494 IF*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
+F Y+PV+N++DGDLCE + +LD + IA L E+ KK
Sbjct: 1288 MFRSYYFPVQNIVDGDLCEMYMTLD--DKYNIANQLNLKVNEIIKK 1331
>UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
albicans|Rep: Pre-mRNA-splicing factor RSE1 - Candida
albicans (Yeast)
Length = 1219
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/85 (31%), Positives = 51/85 (60%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LN K ++ FH+G+ +TS L G+E+++Y + G++G+L+P S+ + +
Sbjct: 1084 LNSCPYKLQNLIEFHIGDIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELL 1143
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSY 509
+L+++M+ + L G+DHL RSY
Sbjct: 1144 FNLQLYMQQSQNNLVGKDHLKLRSY 1168
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 28 QESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQSVSDD 207
+ S+ K + +NQ + FADD R IT+ LD DT+ DKFGN+ + R+ + +S
Sbjct: 1010 KSSIVFAKFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQ 1069
Query: 208 VDEDPT 225
D+D T
Sbjct: 1070 ADDDWT 1075
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y P+KNVIDGDL E+F D + I+ L ++ ++ KK
Sbjct: 1169 YNPIKNVIDGDLLERFLEFDISLKIEISRKLNKSVNDIEKK 1209
>UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomycetaceae|Rep: Pre-mRNA-splicing factor RSE1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1256
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D S VK+ ENQ I FADD R IT LDYDTI DKFGN+ + R+P
Sbjct: 1028 IVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTLDYDTIIGGDKFGNIFVSRVP 1087
Query: 190 QSVSDDVDED 219
+++S D+D
Sbjct: 1088 ETISQQSDKD 1097
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Frame = +3
Query: 225 WKQSTLGQRFLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLP 404
W + +LNG+ + + F++ + TS + +L+ GG E+++Y I G+LG+LLP
Sbjct: 1098 WSLLRYQESYLNGSGSRLKNICEFYLQDIPTSFTKGSLVMGGKESIIYTGIQGTLGLLLP 1157
Query: 405 FTSREDHDFFQHLEMHMR-------------SENSPLCGRDHLSFRSYTTQ*RM*LTEIY 545
++ + F L++ +R L G+DHL FRSY + +
Sbjct: 1158 LSTENEVKFLGDLQLLLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRSYYNPVKNVMDGDL 1217
Query: 546 VNSLTP*TLENKKPSXVIWNVLPPKYQKKLEDIRTRYA 659
+ + K N P + +KK+ ++R R A
Sbjct: 1218 IERFYELSQSMKIRIGTELNRTPREIEKKISEMRHRSA 1255
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2
Query: 497 F*KLYYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
F Y PVKNV+DGDL E+F L + I +L RTP E+ KK
Sbjct: 1202 FRSYYNPVKNVMDGDLIERFYELSQSMKIRIGTELNRTPREIEKK 1246
>UniRef50_Q4T683 Cluster: Chromosome undetermined SCAF8882, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8882,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 149
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +2
Query: 518 VKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
V+NVIDGDLCEQ+NS++P KQK++A +L+RTP EVSKK
Sbjct: 102 VQNVIDGDLCEQYNSMEPHKQKSVAEELDRTPPEVSKK 139
>UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n=1;
Trichomonas vaginalis G3|Rep: CPSF A subunit region
family protein - Trichomonas vaginalis G3
Length = 1142
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I D ES VK K E+ L IFADD PR ++ LD T+ DKFG+ I+RLP
Sbjct: 928 IIAGDAMESFHFVKFDKEEDILSIFADDMVPRHPLSAIGLDRSTVCCGDKFGSFCILRLP 987
Query: 190 QSVSDDVDEDPT 225
++DD + DP+
Sbjct: 988 PDINDDAEIDPS 999
>UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1206
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +1
Query: 1 RHEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIM 180
+ I V D S +K+ +N + FADD R IT LD+DT+ DKFGNV +
Sbjct: 975 KQRIVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHDTVIGGDKFGNVFVN 1034
Query: 181 RLPQSVSDDVDED 219
R+P ++S D++
Sbjct: 1035 RIPFTLSKQADQE 1047
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 13/158 (8%)
Frame = +3
Query: 225 WKQSTLGQRFLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLP 404
W +LN A + + F + + T + TL+ GG E++ Y + GSLG P
Sbjct: 1048 WSLVKYQDHYLNSAGNRLKGLCEFFLQDIPTLFFKGTLVTGGKESIFYTGLCGSLGFFEP 1107
Query: 405 FTSREDHDFFQHLEMHMRSENSP-------------LCGRDHLSFRSYTTQ*RM*LTEIY 545
S+ + FF LE +R P L G+D L FR Y + + +
Sbjct: 1108 LISKLEVSFFTALENSIRKVLDPNLEEHDKKRLYCQLLGKDQLKFRGYYNPVKNVIDGDF 1167
Query: 546 VNSLTP*TLENKKPSXVIWNVLPPKYQKKLEDIRTRYA 659
V K + P ++K+ DIR+R A
Sbjct: 1168 VEYYFELDPRTKTKIATELDRTPRDIERKIADIRSRVA 1205
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
Y PVKNVIDGD E + LDP + IA +L+RTP ++ +K
Sbjct: 1156 YNPVKNVIDGDFVEYYFELDPRTKTKIATELDRTPRDIERK 1196
>UniRef50_A5DXW5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1223
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
+F SV K NQ I ADD R T LDYDTI DKFG ++I RL
Sbjct: 957 VFADSQSASVVFAKFDADGNQFIPIADDVIKRNCTALSKLDYDTIICGDKFGQISISRLD 1016
Query: 190 QSVSDDVDED 219
S VD++
Sbjct: 1017 SQDSRQVDQE 1026
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
+ PVKN+IDGD E + L + I ++++P E+ K+
Sbjct: 1173 FNPVKNIIDGDFVECYLQLLQNWKVKIGEAIDKSPNEIEKR 1213
>UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3b
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1108
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 339 IPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFR 503
I ++Y+ + G +GVL+PF RED +FF LEM +++ SPL S+R
Sbjct: 1001 IKENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYR 1055
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 512 YPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAEVSKK 631
YP VIDGDLC+ FN +DP Q IA +LE TP ++ K
Sbjct: 1059 YPGIGVIDGDLCDYFNQMDPKLQLQIANNLEMTPVQIQLK 1098
>UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Eremothecium gossypii|Rep: Pre-mRNA-splicing factor RSE1
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 1288
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
+ V D+ ESV + +R+NQ I ADD R +T +D T+ D+FGN+ ++RLP
Sbjct: 1022 VAVGDIHESVTLLHFDERKNQFIPVADDVTKRHVTVVKFVDECTVIGGDRFGNIWLLRLP 1081
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLE-RTPAEVSKK 631
Y PV++V DGDLCEQF L P ++ +A ++ R+ E+ ++
Sbjct: 1238 YNPVRHVTDGDLCEQFLELYPSEKNFLAARVDNRSVQEIERR 1279
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 357 ALLYATISGSLGVLLPFTSREDHDFFQHLEMHMR 458
++LYA + G++G L+P +R + +FF LE MR
Sbjct: 1142 SILYAGLQGTIGYLIPLITRREIEFFDLLEQAMR 1175
>UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosoma
cruzi|Rep: Sf3b complex subunit 3 - Trypanosoma cruzi
Length = 1800
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +1
Query: 73 LIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQS 195
L++ A D PR +T+ LD TIAV+D+FG+VA +RLPQ+
Sbjct: 1557 LMLVARDAVPRSVTSVVCLDERTIAVADRFGSVAFLRLPQN 1597
Score = 33.1 bits (72), Expect = 6.4
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +3
Query: 297 HVGETVTSLQRATLIPGGS-------EALLYATISGSLGVLLPFTSREDHDFFQHLE 446
H G+ VT+L+ P G L YAT G++G PF ED F HL+
Sbjct: 1634 HTGQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREEDAVFAAHLQ 1690
>UniRef50_Q3LWA3 Cluster: Splicing factor 3b; n=1; Bigelowiella
natans|Rep: Splicing factor 3b - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP
621))
Length = 1158
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
+ + +SD E + ++ + +I+ R + N LDYDTI +D FGNV + R
Sbjct: 948 NRMVISDFLEGLIVTEYNTHLDTMIVVGYSVYGRSLNNIQFLDYDTILGTDYFGNVLVFR 1007
Query: 184 LPQSVSDDVDEDP 222
+PQ ++ DP
Sbjct: 1008 IPQLITFKSFLDP 1020
>UniRef50_Q6CAH5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Yarrowia
lipolytica|Rep: Pre-mRNA-splicing factor RSE1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 1143
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 HEIFVSDVQESV-FCVKHKKRENQLII-FADDTNPRWITNSCILDYDTIAVSDKFGNVAI 177
+ + V D+++SV CV ++ +I D R +T +DY+T+A+ D+FG +
Sbjct: 929 NRVAVGDIRQSVTVCVVLEEDSGHVIYPLVCDKISRQVTCLFFVDYETVALGDRFGGFTM 988
Query: 178 MRLPQSVSDDVDED 219
+R+P S DED
Sbjct: 989 LRIPSEASKLADED 1002
>UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep:
RepE - Dictyostelium discoideum (Slime mold)
Length = 1139
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Frame = +3
Query: 279 DVVVNFHVGETVTSLQRATLI--PGGSE----ALLYATISGSLGVLLPFTSREDHDFFQH 440
D V ++H+GE++ S++ +L+ P + +LYA+++GS+GV+ S ED FF
Sbjct: 1003 DSVGHYHIGESINSMRHGSLVRLPDSDQPIIPTILYASVNGSIGVVASI-SEEDFIFFSK 1061
Query: 441 LEMHMRSENSPLCGRDHLSFRSYT 512
L+ + + G H ++R+++
Sbjct: 1062 LQKGLNQVVRGVGGFSHETWRAFS 1085
>UniRef50_Q57XR8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1834
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +1
Query: 73 LIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQ 192
L++ A D PR IT LD TIA D+FGNV +RLPQ
Sbjct: 1593 LMLIARDAVPRSITCVACLDERTIAAGDRFGNVVFLRLPQ 1632
>UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1036
Score = 40.3 bits (90), Expect = 0.042
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 279 DVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 446
D V +F VGE VTSL ++ S+ L Y T+ G +GVL+P ++ E+ + +E
Sbjct: 915 DRVASFMVGEMVTSL----MVSPASKTLYYTTLLGQIGVLIPISNEEEFNSLASVE 966
>UniRef50_A7TN11 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1346
Score = 40.3 bits (90), Expect = 0.042
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAE 619
Y PVKN+IDGDLCE+F L+ ++ I +L+ T E
Sbjct: 1296 YAPVKNIIDGDLCERFLYLNSNERLEICKNLKDTKPE 1332
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRL- 186
I V D+ ESV + L ADD R + + LD T+ SDK+ N+ +R+
Sbjct: 1077 IAVGDIHESVMIFDYNSDSKTLKPIADDITKRDVISIEFLDSRTVIGSDKYSNIWTLRID 1136
Query: 187 ---PQSVSDDVD 213
Q V D+V+
Sbjct: 1137 LEDDQKVLDNVE 1148
>UniRef50_Q6CXH8 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Kluyveromyces lactis|Rep: Pre-mRNA-splicing factor RSE1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 1269
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 16 VSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRL 186
V D++ESV K+ N I ADD R +T +D ++ D+FGN ++R+
Sbjct: 1021 VGDIRESVTIFKYDIDNNSFIGVADDIVKRHVTTVKFIDVSSVIGGDRFGNCWVLRV 1077
>UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1980
Score = 38.3 bits (85), Expect = 0.17
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 285 VVNFHVGETVTSLQRATLIPG-GSEALL------YATISGSLGVLLPFTSREDHDFFQHL 443
V HVGE VT+L P G++A L Y+T GS+G +P S ED +L
Sbjct: 1825 VARHHVGELVTALHVQPYDPSQGTDAALATKIVYYSTALGSIGAYVPLLSEEDGALAAYL 1884
Query: 444 EMHMRSENSPLCG 482
+ + S PL G
Sbjct: 1885 QPLLHSHMRPLLG 1897
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 73 LIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLPQS 195
L+ D+ PR IT+ +D TIA SD+FG V +R+P++
Sbjct: 1752 LLQIMTDSVPRHITSVVAVDERTIAASDRFGTVVFLRIPET 1792
>UniRef50_Q04693 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomyces cerevisiae|Rep: Pre-mRNA-splicing factor
RSE1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1361
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 509 YYPVKNVIDGDLCEQFNSLDPGKQKAIAXDLERTPAE 619
Y PV+ VIDGDLCE F L +Q+ +A +L+ E
Sbjct: 1311 YAPVRKVIDGDLCENFLRLSLNEQEFLAKNLKSVQVE 1347
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 16 VSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
V D+ ESV N I + DD+ R +T LD T+ +D++GN +R P
Sbjct: 1087 VGDIHESVTLFIWDPAGNVFIPYVDDSVKRHVTVLKFLDEATVIGADRYGNAWTLRSP 1144
>UniRef50_O77380 Cluster: Putative uncharacterized protein MAL3P6.15;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P6.15 - Plasmodium falciparum
(isolate 3D7)
Length = 2870
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV +++ +QL D + W T+ C L I VSD N I++
Sbjct: 2646 IVVGDIMTSVTILQYDYENSQLFEVCRDYSNIWCTSLCALSKSHIVVSDMDANFIILQKS 2705
Query: 190 QSVSDDVDEDPTGNKALWDRGFLM 261
+ +D D + +L++ G ++
Sbjct: 2706 KFKYNDEDSYKLSSVSLFNHGSII 2729
>UniRef50_UPI0000DA4330 Cluster: PREDICTED: similar to splicing factor
3b, subunit 3; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to splicing factor 3b, subunit 3 - Rattus
norvegicus
Length = 1216
Score = 37.1 bits (82), Expect = 0.40
Identities = 29/76 (38%), Positives = 37/76 (48%)
Frame = +2
Query: 20 LMSKNLYFVSSIRKERIN*LFLLMIPILDG*QIAVFLIMTL*QYLTNLVMWL*CGYHNL* 199
LMS+ + + R + L LLM PI DG + F M L T+L ++ G H
Sbjct: 1002 LMSRKVSSGFATSVMRTSSLSLLMTPIPDGSPLPAFSTMILWLGQTSLATFVWXGSHLTP 1061
Query: 200 VMMLMKILLETKHFGT 247
M MKI LETK GT
Sbjct: 1062 TMRWMKIPLETKPCGT 1077
>UniRef50_Q8Y894 Cluster: Lmo1020 protein; n=13; Listeria|Rep:
Lmo1020 protein - Listeria monocytogenes
Length = 237
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 246 QRFLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPF 407
QR L+ + D+ + +G+T+ L T++P G ++ ++SG + +L+PF
Sbjct: 126 QRILDVVYEWDDINIQTGIGDTILDLGN-TVLPTGESVIMIRSVSGKIRILVPF 178
>UniRef50_Q07SX1 Cluster: Heme peroxidase; n=3; Rhodopseudomonas
palustris|Rep: Heme peroxidase - Rhodopseudomonas
palustris (strain BisA53)
Length = 3113
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 249 RFLNGASQKGDVVVNFHVGETV-TSLQRATLIPGGSEA--LLYATISGSLGVLLPFTSRE 419
RFL ++ GD ++ F G+ + S A L+ GG ++ L+ + + + + F SRE
Sbjct: 3018 RFLTASAADGDTILGFEPGDRLDLSGMDANLVSGGDQSFVLINGAFNAAGQLAVSFESRE 3077
Query: 420 DHDF 431
D DF
Sbjct: 3078 DGDF 3081
>UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza
sativa|Rep: Os07g0203700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 666
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 369 ATISGSLGVLLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFR 503
+T+ GS+ V++P TS E+H Q ++ + + +PL G DH FR
Sbjct: 559 STLLGSIFVMIPLTS-EEHQMLQDVQERLSVHPLTAPLLGNDHAEFR 604
>UniRef50_Q6FLQ6 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
glabrata|Rep: Pre-mRNA-splicing factor RSE1 - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 1296
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 464 KFTIMWA*PFIF*KLYYPVKNVIDGDLCEQFNSL 565
KFT + + Y PVKNVIDGD+CE + +L
Sbjct: 1230 KFTTLDCDHTAYRSYYAPVKNVIDGDICETYLNL 1263
>UniRef50_Q687X5-2 Cluster: Isoform 2 of Q687X5 ; n=2;
Homo/Pan/Gorilla group|Rep: Isoform 2 of Q687X5 - Homo
sapiens (Human)
Length = 283
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>UniRef50_Q687X5 Cluster: Metalloreductase STEAP4; n=32;
Euteleostomi|Rep: Metalloreductase STEAP4 - Homo sapiens
(Human)
Length = 459
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>UniRef50_Q16531 Cluster: DNA damage-binding protein 1; n=44; cellular
organisms|Rep: DNA damage-binding protein 1 - Homo
sapiens (Human)
Length = 1140
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>UniRef50_Q4UGI4 Cluster: Damage-specific DNA binding protein 1,
putative; n=2; Theileria|Rep: Damage-specific DNA binding
protein 1, putative - Theileria annulata
Length = 1501
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
IFV D+ SV +K R+N L D N W T+ +D + VSD GN +++
Sbjct: 1246 IFVGDLMTSVKMLKF--RDNSLHETCRDFNTLWTTSLVAVDNSSCLVSDDSGNFMLLK 1301
>UniRef50_Q7NC21 Cluster: Elongation factor Ts; n=2; Mycoplasma
gallisepticum|Rep: Elongation factor Ts - Mycoplasma
gallisepticum
Length = 292
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 300 VGETVTSLQRATLIP--GGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 473
+GE + SL+R + S Y + +GV++ + +D +F +HL MH+ + N
Sbjct: 132 IGEKI-SLRRVAFVKEEANSSLATYLHSNSRIGVIVKTSKTDDKEFLKHLAMHIAASNPK 190
Query: 474 LCGRDHLS 497
+ +S
Sbjct: 191 FVSQKDVS 198
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,025,824
Number of Sequences: 1657284
Number of extensions: 12892960
Number of successful extensions: 28638
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 27751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28623
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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