Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060541.seq
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.7  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.9  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 330 LSVERLQFHQHEN*PQHLPFVKHH 259
           + +  L  HQH +   HLP V+ H
Sbjct: 111 MKINLLNHHQHHHQHPHLPHVQQH 134


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 239 SALFPVGSSSTSSLTDCGNRIIATLPNLSDTAIVS*SRIQ 120
           S + P+G S  S +TDC       L N+S+ ++    RI+
Sbjct: 30  SLMVPIGHSQ-SVITDCDTSKCQPLSNISEVSLEPGQRIR 68


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +2

Query: 227 ETKHFGTEVS*WCFTKGRCCGQFSCW*NCNLSTESNI-----NSW 346
           E KHF    +  CF    CC   +C  +C ++  +N      NSW
Sbjct: 764 EPKHFLCSYNTHCFALCHCCEFDAC--DCEMTCPNNCACYHDNSW 806


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 64  ENQLIIFADDTNPRWITNSCILDYDTI 144
           E + +IF   T+ RW  N+C L    I
Sbjct: 64  ETKCLIFCVGTDLRWWNNTCGLQVPAI 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,717
Number of Sequences: 2352
Number of extensions: 13372
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)