Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060541.seq
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 165 2e-40
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 165 2e-40
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 165 2e-40
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 165 2e-40
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 165 2e-40
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 165 2e-40
U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding fa... 34 0.54
U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein. 34 0.54
L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1 pr... 34 0.54
BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA bin... 34 0.54
BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA bin... 34 0.54
BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein. 34 0.54
BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA bin... 34 0.54
AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA bin... 34 0.54
AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum G... 34 0.54
AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prost... 34 0.54
AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prost... 34 0.54
AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein. 31 5.0
AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open readi... 31 5.0
AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens ... 31 5.0
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 1118 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 1177
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 1178 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1237
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 1238 PEVSKKLEDIRTRYA 1252
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 1034 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 1093
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 1094 LPPNTNDEVDEDPTGNKALWDRGLL 1118
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 264 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 323
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 324 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 384 PEVSKKLEDIRTRYA 398
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 180 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 239
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 240 LPPNTNDEVDEDPTGNKALWDRGLL 264
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 1082 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 1141
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 1142 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1201
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 1202 PEVSKKLEDIRTRYA 1216
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 998 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 1057
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 1058 LPPNTNDEVDEDPTGNKALWDRGLL 1082
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 264 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 323
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 324 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 384 PEVSKKLEDIRTRYA 398
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 180 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 239
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 240 LPPNTNDEVDEDPTGNKALWDRGLL 264
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 264 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 323
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 324 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 383
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 384 PEVSKKLEDIRTRYA 398
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 180 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 239
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 240 LPPNTNDEVDEDPTGNKALWDRGLL 264
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 165 bits (400), Expect = 2e-40
Identities = 78/135 (57%), Positives = 97/135 (71%)
Frame = +3
Query: 255 LNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFF 434
LNGASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFF
Sbjct: 1082 LNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF 1141
Query: 435 QHLEMHMRSENSPLCGRDHLSFRSYTTQ*RM*LTEIYVNSLTP*TLENKKPSXVIWNVLP 614
QH+EMH+RSE+ PLCGRDHLSFRSY + + +K + P
Sbjct: 1142 QHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTP 1201
Query: 615 PKYQKKLEDIRTRYA 659
P+ KKLEDIRTRYA
Sbjct: 1202 PEVSKKLEDIRTRYA 1216
Score = 134 bits (325), Expect = 2e-31
Identities = 56/85 (65%), Positives = 71/85 (83%)
Frame = +1
Query: 4 HEIFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMR 183
H + VSDVQES V++K+ ENQLIIFADDT PRW+T + +LDYDT+A +DKFGN+ ++R
Sbjct: 998 HRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVR 1057
Query: 184 LPQSVSDDVDEDPTGNKALWDRGFL 258
LP + +D+VDEDPTGNKALWDRG L
Sbjct: 1058 LPPNTNDEVDEDPTGNKALWDRGLL 1082
>U32986-1|AAA88883.1| 1140|Homo sapiens UV-damaged DNA binding factor
protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>U18299-1|AAC50349.1| 1140|Homo sapiens DDBa p127 protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>L40326-1|AAA62838.1| 1140|Homo sapiens X-associated protein 1
protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>BC051764-1|AAH51764.1| 1140|Homo sapiens damage-specific DNA binding
protein 1, 127kDa protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>BC050530-1|AAH50530.1| 1140|Homo sapiens damage-specific DNA binding
protein 1, 127kDa protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>BC011686-1|AAH11686.1| 1140|Homo sapiens damage-specific DNA binding
protein 1, 127kDa protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>AY960579-1|AAX44048.1| 1140|Homo sapiens damage-specific DNA binding
protein 1, 127kDa protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>AJ002955-1|CAA05770.1| 1140|Homo sapiens Xeroderma Pigmentosum Group
E Complementing protein protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.54
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = +1
Query: 10 IFVSDVQESVFCVKHKKRENQLIIFADDTNPRWITNSCILDYDTIAVSDKFGNVAIMRLP 189
I V D+ SV + +K E A D NP W++ ILD D ++ N+ + +
Sbjct: 921 ILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 980
Query: 190 QSVSDDVDEDPTGNKALWDRG 252
+ + D + L+ G
Sbjct: 981 SAATTDEERQHLQEVGLFHLG 1001
>AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prostate
protein 2 variant 2 protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prostate
protein 2 variant 1 protein.
Length = 459
Score = 33.9 bits (74), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23153 fis, clone LNG09441. ).
Length = 283
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 324 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 443
Q+ TL+P G+E L Y+ + +++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSDIIIIAIHREHYDFLTEL 92
>BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 267 SQKGDVVVNFHVGETVTSLQRATLIP 344
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open reading
frame 22 protein.
Length = 976
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 267 SQKGDVVVNFHVGETVTSLQRATLIP 344
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens
cDNA FLJ44315 fis, clone TRACH3000014. ).
Length = 976
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 267 SQKGDVVVNFHVGETVTSLQRATLIP 344
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,370,728
Number of Sequences: 237096
Number of extensions: 2050052
Number of successful extensions: 10876
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10864
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -