Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060539.seq
(686 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 27 0.14
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 4.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.1
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 5.4
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 5.4
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 22 5.4
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 7.2
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 9.5
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 9.5
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 9.5
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 27.1 bits (57), Expect = 0.14
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 665 LHCSISQDDF-SLLWLYDPAQLPQVATGKVIAHGKLLPDNVKVLRQLLHGTYDNV 504
+HC + S++W D QLP KV +G L+ +NV+ R TYD V
Sbjct: 530 VHCPFAGHPVDSVVWERDGRQLPINRKQKVFINGTLIIENVE--RASDQATYDCV 582
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 61 LIKTRFFSLPNASLFLATMSLDNMYCTR 144
L+K ++LP +++ +A + +DN C R
Sbjct: 533 LLKRENYTLPASAVGIAWLYVDNDCCIR 560
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 415 SLQMPVLSSMLVEHCAMY 468
+L +PVL S L+ C MY
Sbjct: 167 NLSVPVLLSGLIAMCGMY 184
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 415 SLQMPVLSSMLVEHCAMY 468
+L +PVL S L+ C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 415 SLQMPVLSSMLVEHCAMY 468
+L +PVL S L+ C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 416 LYITLFTSEAGRMPIRVHRLYNAANHK 336
+Y T+ GR+PI + LY HK
Sbjct: 314 VYDASITASLGRVPIWPYTLYFRMPHK 340
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 416 LYITLFTSEAGRMPIRVHRLYNAANHK 336
+Y T+ GR+PI + LY HK
Sbjct: 321 VYDASITASLGRVPIWPYTLYFRMPHK 347
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 443 MLDKTGIC 420
MLDKTGIC
Sbjct: 95 MLDKTGIC 102
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 7.2
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 208 NCFVCAQCFRMFPDGV 255
NC +C+ +F DG+
Sbjct: 527 NCTASTRCWEVFMDGI 542
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 175 IVNSNGELWHTNC 213
++N N LW+ NC
Sbjct: 168 MINMNCALWYINC 180
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 175 IVNSNGELWHTNC 213
++N N LW+ NC
Sbjct: 168 MINMNCALWYINC 180
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 175 IVNSNGELWHTNC 213
++N N LW+ NC
Sbjct: 168 MINMNCALWYINC 180
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,179
Number of Sequences: 336
Number of extensions: 4328
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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