Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060538.seq
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 80 3e-16
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 38 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 36 0.005
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 35 0.012
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 33 0.050
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.35
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 29 0.46
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.46
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 29 0.46
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.61
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.81
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 28 1.4
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 27 3.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.3
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 4.3
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.3
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 5.7
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 10.0
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 25 10.0
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 79.8 bits (188), Expect = 3e-16
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +2
Query: 194 AVPTESCEFGSPKYFALC--GVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFK 367
A P ++ + +P+Y+ LC G ++ C H+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTT--HSAITPLDLIKCRKQVNPNIYPGNIAGFK 66
Query: 368 VSVREEGVRGLAKGWAPTFIGYSMQGLCKFRF 463
+ +EG+RGL G PT IGYS+QG K+ F
Sbjct: 67 TILSKEGLRGLYTGGMPTLIGYSLQGCGKYGF 98
Score = 28.7 bits (61), Expect = 0.81
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 411 GLPLSLGIQCRVSASFGFYEVFKVAYAGMLDDEXPTLTVPFVYLA 545
G+P +G + +GFYE+FK Y+ ++ + +YLA
Sbjct: 81 GMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLA 125
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 547 ASASAEFIADNRLSPMEA 600
ASASAE +AD L PMEA
Sbjct: 126 ASASAELLADIMLCPMEA 143
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 457
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQF 170
Score = 29.1 bits (62), Expect = 0.61
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAP 418
PL +++ RLQV +++++N + R +G+ G KG+ P
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLP 246
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 35.9 bits (79), Expect = 0.005
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +2
Query: 182 AASAAVPTESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQV-------DAEK 340
A A PT+ + G F L G + C AV T P +++K R Q+ D K
Sbjct: 9 ALPAHNPTQVKKLGPVSGF-LSGGLAACGAV---TLTNPFEVIKTRFQLQGQLTKLDPSK 64
Query: 341 --YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRF 463
YK+V F + R EG+RGL +G ++ C+ F
Sbjct: 65 RIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNGCRLGF 107
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 409
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 34.7 bits (76), Expect = 0.012
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 TAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 412
TA+ P D++K R+Q++ YKN ++ K+ EG RG G+
Sbjct: 225 TAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGF 268
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 32.7 bits (71), Expect = 0.050
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 218 FGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRG 397
FG+PK AL G + + PLD++K ++ + E Y+ VV +E G+ G
Sbjct: 168 FGAPKGAALSGAITAA-------VLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFG 217
Query: 398 LAKG 409
KG
Sbjct: 218 FEKG 221
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.35
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Frame = +2
Query: 290 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGY 433
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGY 81
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.5 bits (63), Expect = 0.46
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 457
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKF 83
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +2
Query: 296 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 418
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.46
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 287 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
A P D+VK ++Q D YKN K + G+RG +G+ P +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLV 279
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 29.5 bits (63), Expect = 0.46
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 290 VVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 439
+ P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 131 MTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +2
Query: 206 ESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVS 373
E GSP Y L + H+ + P+D +K R+Q V N+VN
Sbjct: 11 EGLPIGSPMYAHLLAGAF--SGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKI 68
Query: 374 VREEGVRGLAKGWAPTFIG 430
EGV L +G + +G
Sbjct: 69 SSTEGVYSLWRGISSVIMG 87
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.61
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 412
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.81
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 293 VPLDLVKCRLQVDAEKYK 346
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = +1
Query: 448 LQVSVSMKCSKSPTPVCWTTXRLHLPYLSCTWRASASAEFIADNRLSPM 594
L +SV ++ + TP+ W + + P +C R A +++++P+
Sbjct: 123 LDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPL 171
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 409
PLD +K R Q + + + F+ +V+ EG++GL +G
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRG 72
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 116 PLSTAQCQSTVAPVAIEQTGGMAASAAVPTES 211
P ST STVAP + + G ++ +PT S
Sbjct: 604 PTSTPLSNSTVAPTSTFTSSGFNTTSGLPTSS 635
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -1
Query: 444 PCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 349
P E P+ G HPL RP PSS + P++T
Sbjct: 155 PLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 409
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +2
Query: 140 STVAPVAIEQTGGMAASAA-----VPTESCEF 220
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.0 bits (52), Expect = 10.0
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
TA P++ VK +Q E +YK + FK + EEGV L +G + Y
Sbjct: 43 TAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYF 102
Query: 437 MQGLCKFRF 463
F F
Sbjct: 103 PTQALNFAF 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,541,403
Number of Sequences: 5004
Number of extensions: 45438
Number of successful extensions: 168
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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