Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060538.seq
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 105 4e-23
06_01_0755 + 5648872-5649471,5650092-5650453,5650576-5650619,565... 104 6e-23
04_04_0045 + 22337089-22337385,22338437-22338715,22338728-223387... 96 2e-20
09_04_0372 + 17026551-17026778,17027469-17027830,17027925-170279... 89 2e-18
03_02_0454 + 8626832-8627134,8627255-8627606,8627705-8627748,862... 87 2e-17
09_06_0221 - 21649030-21649290,21649553-21649610,21649943-216502... 76 3e-14
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 42 3e-04
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 42 6e-04
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 42 6e-04
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 38 0.006
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 38 0.007
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 38 0.010
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 38 0.010
08_02_1279 - 25841767-25842017,25842181-25842418,25842685-258430... 37 0.013
03_02_0646 + 10141967-10142476,10143721-10144254 37 0.017
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 36 0.022
03_01_0534 + 3996479-3997458,3997938-3998265 36 0.039
01_01_0877 - 6878905-6879600,6880696-6880968 36 0.039
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 35 0.068
01_03_0118 - 12688137-12688162,12688236-12688395,12689442-126895... 35 0.068
04_04_0048 + 22351788-22352177,22353175-22353711 34 0.12
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 33 0.28
03_06_0002 + 30917082-30917146,30917594-30917975,30918083-309182... 32 0.36
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 32 0.36
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 32 0.36
05_03_0668 + 16793061-16793181,16793289-16793384,16794406-167945... 32 0.48
02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313... 31 0.64
10_07_0101 - 12872296-12873288 31 0.84
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 31 0.84
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 30 1.5
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 30 1.5
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722... 29 2.6
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 29 2.6
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 29 2.6
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998... 29 4.5
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 29 4.5
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 29 4.5
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 29 4.5
05_04_0204 - 19022329-19023990 28 5.9
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 28 7.8
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 28 7.8
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 28 7.8
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 105 bits (251), Expect = 4e-23
Identities = 58/167 (34%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 140 STVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC--GVVVFCHAV*XHTAVVPLDLVK 313
S +P GG S P E E SP ++A C G + C H AV PLDLVK
Sbjct: 37 SPASPAPGAVGGGAPISIQAPREKIEMYSPAFYAACTAGGIASCGLT--HMAVTPLDLVK 94
Query: 314 CRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRFL*SVQSXXXX 493
C +Q+D KYK++ +GF V ++E+G RG +GW PT +GYS QG CKF F +
Sbjct: 95 CNMQIDPAKYKSITSGFGVLLKEQGPRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSD 154
Query: 494 XXXXXXXXXXXXXXVPGGRLRXRNSSPTIACRPWKPLXVRIQXMPGF 634
G + C P++ + VR+Q PGF
Sbjct: 155 IAGPEYAQKYKTLIYLAGSASAEVIADVALC-PFEAVKVRVQTQPGF 200
>06_01_0755 +
5648872-5649471,5650092-5650453,5650576-5650619,
5651324-5651538,5651643-5651767,5651862-5651931
Length = 471
Score = 104 bits (250), Expect = 6e-23
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Frame = +2
Query: 173 GGMAASAAVPTESCEFGSPKYFALC--GVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYK 346
GG P E E SP ++A C G + C H AV PLDLVKC +Q+D KYK
Sbjct: 150 GGAPIEIQAPREKIEMYSPAFYAACTAGGIASCGLT--HMAVTPLDLVKCNMQIDPAKYK 207
Query: 347 NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRFL*SVQSXXXXXXXXXXXXXXX 526
++ +GF + +E+GVRG +GW PT +GYS QG CKF F +
Sbjct: 208 SITSGFGILAKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAQKYK 267
Query: 527 XXXVPGGRLRXRNSSPTIACRPWKPLXVRIQXMPGF 634
G + C P++ + VR+Q PGF
Sbjct: 268 TLIYLAGSASAEVIADVALC-PFEAVKVRVQTQPGF 302
>04_04_0045 +
22337089-22337385,22338437-22338715,22338728-22338798,
22338883-22338926,22340670-22340884,22340958-22341082,
22341142-22341220,22341278-22341367
Length = 399
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = +2
Query: 89 AARNSPFRGPLSTAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC--GVVVF 262
AA +SP + + AP ++ A S P E SP ++A C G +
Sbjct: 22 AASSSPSFAAAAAVGVRGVPAP-SLAGPAVWARSPREPAGKIEMYSPAFYAACTAGGIAS 80
Query: 263 CHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 442
C H V PLDLVKC +Q+D KYK++ +GF V ++E+G RG +GW PT +GYS Q
Sbjct: 81 CGLT--HMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQ 138
Query: 443 GLCKFRF 463
G CKF F
Sbjct: 139 GACKFGF 145
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 414 LPLSLGIQCRVSASFGFYEVFKVAYAGMLDDEXPTLTVPFVYLAG 548
+P LG + + FGFYE FK Y+ + E +YLAG
Sbjct: 129 VPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAG 173
>09_04_0372 +
17026551-17026778,17027469-17027830,17027925-17027968,
17028079-17028293,17028405-17028529,17028617-17028692
Length = 349
Score = 89.4 bits (212), Expect = 2e-18
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Frame = +2
Query: 173 GGMAASAAVPTES----CEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEK 340
G A A P+E E SP Y++ C H AV PLD++KC +Q+D K
Sbjct: 22 GAPAVVAGAPSEPPFGMIELFSPAYYSACAFGGAAACGLTHAAVTPLDVIKCNIQIDPTK 81
Query: 341 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRFL*SVQSXXXXXXXXXXXXX 520
YK+ + F V +RE+G RG +GWAPTF+GYS QG K+ +
Sbjct: 82 YKSTTSAFGVVMREQGARGFYRGWAPTFLGYSAQGAFKYGLYEVFKKEYADMAGPEYAAR 141
Query: 521 XXXXXVPGGRLRXRNSSPTIACRPWKPLXVRIQXMPGF 634
G ++ C P + + VR+Q PG+
Sbjct: 142 YKTLIYLAGSATAEVAADVALC-PMEAVKVRVQTQPGY 178
>03_02_0454 +
8626832-8627134,8627255-8627606,8627705-8627748,
8629014-8629035,8629136-8629350,8629468-8629592,
8629681-8629756
Length = 378
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/153 (30%), Positives = 69/153 (45%)
Frame = +2
Query: 176 GMAASAAVPTESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVV 355
G+ + + + +P ++A C + H AV PLDLVKC +QVD KY+++
Sbjct: 52 GLEEGRKADSAAMQLHTPLFYATCALGGLLSTGLTHLAVTPLDLVKCNMQVDPGKYRDIS 111
Query: 356 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRFL*SVQSXXXXXXXXXXXXXXXXXX 535
+GF V ++E+G+ G KGW T +GYS QG CKF F +
Sbjct: 112 SGFGVLLQEQGLGGFFKGWMATLVGYSSQGACKFGFYEFFKKCYSDIAGPEHAEKWKTFI 171
Query: 536 VPGGRLRXRNSSPTIACRPWKPLXVRIQXMPGF 634
+ C P + + VR+Q PGF
Sbjct: 172 YLAASASAEMIADVALC-PMEAVKVRVQTQPGF 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 426 LGIQCRVSASFGFYEVFKVAYAGMLDDEXPTLTVPFVYLA 545
+G + + FGFYE FK Y+ + E F+YLA
Sbjct: 135 VGYSSQGACKFGFYEFFKKCYSDIAGPEHAEKWKTFIYLA 174
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +1
Query: 547 ASASAEFIADNRLSPMEA 600
ASASAE IAD L PMEA
Sbjct: 175 ASASAEMIADVALCPMEA 192
>09_06_0221 -
21649030-21649290,21649553-21649610,21649943-21650292,
21650605-21650799
Length = 287
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +2
Query: 224 SPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLA 403
SP+Y+ALC A H A+ PLD++K +QV+ KY ++ +G + V+EEG L
Sbjct: 32 SPEYYALCTGGGMLAAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVKEEGASSLW 91
Query: 404 KGWAPTFIGYSMQGLCKF 457
+GWA F GY QG CKF
Sbjct: 92 RGWAGKFFGYGFQGGCKF 109
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +2
Query: 263 CHAV*XHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
C + +A P+D+V+ R+ V EK Y+ + + REEG R L +GW P+ IG
Sbjct: 155 CAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALGSVYREEGFRALYRGWLPSVIG 214
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVD---AEKYKNVVNGFKVSVREEGVRGLAKG 409
TAV PL+ +K LQV + KY + G K R EG+RGL KG
Sbjct: 59 TAVAPLERMKILLQVQNPHSIKYNGTIQGLKYIWRTEGLRGLFKG 103
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 457
PL+++K RL ++ E Y ++ F R +G+RGL G PT IG C +
Sbjct: 222 PLEVIKDRLTINREVYPSISVTFSKIYRTDGIRGLYAGLCPTLIGMLPYSTCYY 275
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEKYK---NVVNGFKVSVREEGVRGLAKGW 412
T PL++ + RL V A + K +++ ++EEG+ GL +GW
Sbjct: 312 TISFPLEVARKRLMVGALQGKCPPHMIAALAEVIQEEGLPGLYRGW 357
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PL+L+K RL ++ + Y N ++ F +REEG L +G P+ IG
Sbjct: 250 PLELIKTRLTIEKDVYNNFLHAFVKILREEGPSELYRGLTPSLIG 294
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
TA PL++ + ++QV A + YKNV + + EG+ GL KG P+ I
Sbjct: 340 TATFPLEVARKQMQVGAVGGRQVYKNVFHALYCIMENEGIGGLYKGLGPSCI 391
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 287 AVVPLDLVKCRLQVDAEK---YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 454
+V P D+VK +QVD K Y V+ FK + +GV+GL KG+ P M + K
Sbjct: 226 SVYPTDVVKSVIQVDDYKKPRYSGSVDAFKKILAADGVKGLYKGFGPAMAREEMGDVAK 284
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 287 AVVPLDLVKCRLQVDA---EKYKNVVNGFKVSVREEGVRGLAKGWAP 418
+V P D+VK +QVD KY ++ F+ + +GV+GL KG+ P
Sbjct: 524 SVYPTDVVKSVIQVDDYKNPKYSGSMDAFRKILAADGVKGLYKGFGP 570
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Frame = +2
Query: 296 PLDLVKCRLQVD---AEKY--------KNVVNGFKVSVREEGVRGLAKGWAPT 421
P +L+KCRLQ AE K ++ K VRE G++GL KG PT
Sbjct: 124 PTELIKCRLQAQSALAEAAAASGVALPKGPIDVAKHVVREAGMKGLFKGLVPT 176
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 296 PLDLVKCRL--QVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PLDLV+ RL Q + Y+ + + R+EGV+GL KG T +G
Sbjct: 162 PLDLVRTRLAAQTNTAYYRGISHALYAICRDEGVKGLYKGLGATLLG 208
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVD-----AEKYKNVVNG-FKVSVREEGVRGLAKGWAPTF 424
T PLDLV+ R+Q++ A Y+ + G F VR E +RGL +G P +
Sbjct: 253 TITFPLDLVRRRMQLEGAAGRARVYQTGLFGTFGHIVRTESLRGLYRGILPEY 305
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PL+L+K RL + Y N ++ VREEG L +G P+ IG
Sbjct: 248 PLELIKTRLTIQRGVYDNFLHALVKIVREEGPTELYRGLTPSLIG 292
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPT 421
TA PL++ + +QV A + YKN+++ + +EGV GL +G P+
Sbjct: 338 TATFPLEVARKHMQVGAVGGRKVYKNMLHALLSILEDEGVGGLYRGLGPS 387
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 296 PLDLVKCRL--QVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PLD+V+ RL Q YK + + R+EGV+GL KG T +G
Sbjct: 132 PLDVVRTRLATQKTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLG 178
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVD-----AEKYKNVVNG-FKVSVREEGVRGLAKGWAPTFI 427
TA PLDLVK R+Q+ + K+ + G + ++EG+RG +G P ++
Sbjct: 223 TATFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIFQKEGLRGFYRGIVPEYL 276
>08_02_1279 -
25841767-25842017,25842181-25842418,25842685-25843018,
25843498-25843592,25845461-25845700
Length = 385
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 457
PL+++K RL V+ E Y ++ F + +G+ GL G PT +G C +
Sbjct: 218 PLEVLKDRLTVNREAYPSIGLAFNKIYQTDGIGGLYAGLCPTLVGMLPYSTCYY 271
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEKYK---NVVNGFKVSVREEGVRGLAKGWA 415
T PL++ + RL V + K +++ +EEG++GL +GWA
Sbjct: 308 TISFPLEVARKRLMVGTLQGKCPPHMIAALAEVFQEEGIKGLYRGWA 354
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 296 PLDLVKCRLQVD-AEKYKNVVNGFKVSVREEGVRGLAKGWAP 418
P+D++K RLQ+D + Y+ + + VR EGVR L KG P
Sbjct: 59 PIDVIKTRLQLDRSGAYRGIAHCGTTVVRSEGVRALWKGLTP 100
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 296 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAP 418
P D+VK RL KYK +V+ + EEG+R L KG P
Sbjct: 270 PFDVVKTRLMAQGRTGDIKYKGMVHAIRTIYTEEGLRALWKGLLP 314
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQV---------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
T + PLD++K RLQV A + +++GF+ ++ EG+ GL +G +PT +
Sbjct: 33 TVLCPLDVIKTRLQVYGLPSNLSSTAPPGRVIISGFQHILKNEGLPGLYRGLSPTIVALF 92
Query: 437 MQGLCKFRFL 466
K+ F+
Sbjct: 93 PTWAAKYCFM 102
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 35.5 bits (78), Expect = 0.039
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +2
Query: 158 AIEQTGGMAASAAVPTESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAE 337
A+E T SAAV E + + G V A+ P+D++ RL V
Sbjct: 109 ALEATKSSVGSAAVRLGVSEPAATAAASAAGGV--SAAIAAQVVWTPVDVISQRLMVQTS 166
Query: 338 ---KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
+Y+ V+ FK + +GVRGL +G+ + + Y+
Sbjct: 167 STCRYRGGVDAFKKILLADGVRGLYRGFGLSIVTYA 202
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +2
Query: 296 PLDLVKCRLQVDA--EKYKNVVNGFKVSVREEGV----RGLAKGWAPTFI 427
PLD+VK RLQ +Y+ + + F+ SVREEG+ RGL A F+
Sbjct: 243 PLDVVKSRLQAQGYPPRYRGIADCFRRSVREEGLPVLWRGLGTAVARAFV 292
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKN--------VVNGFKVSVREEGVRGLAKGWAPT 421
P++LVK RLQ++A K+ V+ + +R+EGVRG+ +G A T
Sbjct: 138 PVELVKIRLQLEAAGQKHRRPGDHHGPVDMARDILRKEGVRGIYRGLAVT 187
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Frame = +2
Query: 296 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PLD+V+ R QV D Y+N + R EG+RGL G+ P +G
Sbjct: 35 PLDVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLG 86
>01_03_0118 -
12688137-12688162,12688236-12688395,12689442-12689583,
12689680-12689876,12690374-12690755,12692317-12692399
Length = 329
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKY----KNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 445
P+D +K RLQV + Y +V+ +V + E+G RG +G+ P F+ S+ G
Sbjct: 259 PIDTIKTRLQV-MDNYGRGRPSVMKTTRVLLEEDGWRGFYRGFGPRFLNMSLWG 311
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +2
Query: 296 PLDLVKCRLQVDAE--------KYKNVVNGFKVSVREEGVRGLAKGWAP 418
P DL+K R+Q D+ +Y + + F VR EG RGL KG P
Sbjct: 135 PADLIKVRMQADSRLLSQGIQPRYTGIFDAFTKIVRAEGFRGLWKGVVP 183
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 296 PLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 433
PLD++K RLQV Y ++ + EG+ GL KG P I Y
Sbjct: 278 PLDVIKTRLQVQGSTTSYNGWLDAITKTWANEGMSGLFKGSIPRIIWY 325
>03_06_0002 +
30917082-30917146,30917594-30917975,30918083-30918279,
30918372-30918513,30919287-30919415,30919460-30919471
Length = 308
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 445
P+D +K RLQV+ K K + + + E+G +G +G P F S G
Sbjct: 253 PIDTIKTRLQVNQNKPK-AMEVVRRLIAEDGWKGFYRGLGPRFFSSSAWG 301
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +2
Query: 293 VPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
VP+D+V +L V +YK ++ + ++ +G+RGL +G+ + + YS
Sbjct: 145 VPIDVVSQKLMVQGYSGHVRYKGGLDVAQQIIKADGIRGLYRGFGLSVMTYS 196
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 341 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRF 463
YK +++ K R+ G+RGL +G AP+ G KF F
Sbjct: 186 YKGILDCVKTIYRQNGLRGLYRGMAPSLYGIFPYSGLKFYF 226
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +2
Query: 296 PLDLVKCRLQVDAE------KYKNVVNGFKVSVREEGVRGLAKGWAP 418
P DLVK RLQ D + Y +N + +R+EG+ L G P
Sbjct: 131 PTDLVKVRLQADGKATTVKRHYSGALNAYATIIRQEGIGALWTGLGP 177
>05_03_0668 +
16793061-16793181,16793289-16793384,16794406-16794512,
16794726-16794774,16794858-16794967,16795329-16795423,
16795524-16795612,16795775-16795869,16795976-16796053,
16796425-16796481,16796776-16797027
Length = 382
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 287 AVVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
A PL +VK R Q + YK + K EEG+RGL G P G S
Sbjct: 149 ATNPLWVVKTRFQTQGIRAGVIPYKGTLAALKRIAHEEGIRGLYSGLVPALAGIS 203
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Frame = +2
Query: 176 GMAASAAVPTESCEFGSPKYFALCGVVVFCHA-------V*XHTAVVPLDLVKCRLQVDA 334
G A++ P + A + CHA V T V PLD++K R QV
Sbjct: 3 GDVATSPAPAPPSASSQQSHHATSARGLLCHAAAGASAGVVAATFVCPLDVIKTRFQVHG 62
Query: 335 -EKYKN-------VVNGFKVSVREEGVRGLAKGWAPTFI 427
K ++ + + EG RG+ +G +PT +
Sbjct: 63 WPKLATGTIGGSVIIGSLQQIAQREGFRGMYRGLSPTIL 101
>02_05_0230 +
27029725-27030871,27030995-27031113,27031225-27031349,
27031491-27031590,27031680-27031757,27032818-27032901,
27033077-27033162,27033869-27034049,27034596-27034646
Length = 656
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +2
Query: 248 GVVVFCHAV*XHTAVV---PLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGL 400
G +FC TA + P D+VK R+Q+ A KY V++ K + EG++GL
Sbjct: 521 GQTLFCGGFAGSTAALCTTPFDVVKTRVQLQALSPISKYDGVLHALKEIFQHEGLQGL 578
>10_07_0101 - 12872296-12873288
Length = 330
Score = 31.1 bits (67), Expect = 0.84
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +2
Query: 158 AIEQTGGMAASAAVPTESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAE 337
A+E T SAAV E + + G V AV P+D+V RL V
Sbjct: 114 ALEATKSAVGSAAVRLGVAEPAASAAASAAGGV--SAAVAAQVVWTPVDVVSQRLMVQTA 171
Query: 338 K----YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 436
Y+ + + +R +GVRGL +G+ + + Y+
Sbjct: 172 AAGPPYRGGADALRRILRADGVRGLYRGFGVSVLTYA 208
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 243 RAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAVDSGPRNGEFRAASS 82
R G P ++ + GTAA PPV +IAT + W A G G AA +
Sbjct: 388 RLSQRGSPKAETTAGTAA---APPVAAIATSPAIGW-VAPQPGAHPGRLLAAGA 437
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRFL*SV 475
P+D+VK R+ D+ Y + ++ F +++ +G KG+ P F + F L V
Sbjct: 236 PVDVVKSRMMGDSA-YTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNVIMFLTLEQV 294
Query: 476 Q 478
Q
Sbjct: 295 Q 295
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Frame = +2
Query: 293 VPLDLVKCRLQVD-------AEKYKNVVNGFKVSVREEGVRGLAKGWAP 418
+PLD K RLQ+ A KY+ ++ REEG L KG P
Sbjct: 31 IPLDTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKGIVP 79
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 287 AVVPLDLVKCRLQV---DAEKYKNVVNGFKVSVREEGVRGLAKG 409
A P+D V+ R+ + +A KY + ++ FK V +EG + L KG
Sbjct: 302 ASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVAKEGAKSLFKG 345
>10_08_0397 +
17571492-17571664,17571875-17572034,17572140-17572222,
17572333-17572468,17572515-17572610,17573105-17573218,
17573322-17573405,17573493-17573648,17573744-17573818,
17574318-17574424,17574508-17574688,17574832-17575020,
17575397-17575477,17575621-17575755,17576007-17576329,
17576503-17576608,17576734-17576883,17577034-17577180
Length = 831
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 261 NTTTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDW 136
N TTPQ L D ++ + T A+ + S ATG VDW
Sbjct: 123 NVTTPQNP--LRDASNPSGLLTIAEETLTEFLSKATGTAVDW 162
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +2
Query: 293 VPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 412
VP ++VK R+Q+ ++K + ++ +R+EG +GL G+
Sbjct: 116 VPTEVVKQRMQMS--QFKTAPDAVRLIIRKEGFKGLYAGY 153
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
Frame = +2
Query: 242 LCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEK-------------YKNVVNGFKVSVRE 382
LCG F A PLD+VK R Q++ K YK + + K V +
Sbjct: 245 LCG---FAAGTFSKAACHPLDVVKKRFQIEGLKRHPRYGARIESSTYKGMYHALKEIVAK 301
Query: 383 EGVRGLAKGWAPTFIGYSMQGLCKF 457
EG GL KG P+ + + G F
Sbjct: 302 EGFGGLYKGLFPSLVKSAPAGAVTF 326
>11_04_0169 +
14397380-14397652,14398317-14398874,14399593-14399823,
14399924-14400064,14401051-14401248,14401319-14401591,
14401959-14401976
Length = 563
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 SSLLDAARNSPFRGPLSTAQCQSTVAPVAIEQTGG--MAASAAVPTES 211
SS +R PFR + S APV +E GG A AA P S
Sbjct: 39 SSRCSFSRGGPFRVHCAVTATTSAAAPVVVEAPGGGMRLAYAAAPDSS 86
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 VPLDLVKCRL-QVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFI 427
+ + ++K RL ++D+EK + + + RE G+RG KG PT I
Sbjct: 171 IEVSILKDRLYKLDSEKPRPYGTIQAVREVYRESGIRGFWKGLIPTLI 218
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
P+D VK RLQ+ + Y V + + +R+EG+ + T +
Sbjct: 157 PMDTVKQRLQLTSSPYTGVSHCVRTVLRDEGLGAFFASYRTTVV 200
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 VPLDLVKCRL-QVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFI 427
+ + ++K RL ++D+EK + + + RE G+RG KG PT I
Sbjct: 323 IEVSILKDRLYKLDSEKPRPYGTIQAVREVYRESGIRGFWKGLIPTLI 370
>05_04_0204 - 19022329-19023990
Length = 553
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = +2
Query: 401 AKGWAPTFIGYS--MQGLCK 454
AKGW P I YS M GLCK
Sbjct: 271 AKGWTPDVITYSSYMDGLCK 290
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Frame = +2
Query: 296 PLDLVKCRLQV----DAEK---YKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
PL +VK RLQV D +K YK + +R EG+ GL KG + +
Sbjct: 254 PLLVVKARLQVKQIIDDDKRHRYKGTFDAITKMIRYEGLSGLYKGMSTKIV 304
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDA---EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
TA+ P+DLVK RLQ A K ++ + +EG R +G P+ +G
Sbjct: 344 TAIYPIDLVKTRLQTFACGSGKIPSLGALSRDIWMQEGPRAFYRGLVPSLLG 395
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEKYKN--VVNGFKVSVREEGVRGLAKG 409
TAV PL+ VK LQ +++ ++ + + EG+RG KG
Sbjct: 45 TAVAPLERVKILLQTRTHGFQSLGILQSLRKLWQYEGIRGFYKG 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,462,096
Number of Sequences: 37544
Number of extensions: 373905
Number of successful extensions: 1161
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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