Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060538.seq
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 154 7e-38
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 9e-05
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 43 2e-04
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 41 8e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.030
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.052
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 33 0.28
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 32 0.37
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.37
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.85
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.85
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.85
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.5
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.6
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_6885| Best HMM Match : GLE1 (HMM E-Value=0.00012) 29 4.5
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 7.9
SB_22271| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 28 7.9
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 28 7.9
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 7.9
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 154 bits (373), Expect = 7e-38
Identities = 90/198 (45%), Positives = 111/198 (56%)
Frame = +2
Query: 68 MFSSLLDAARNSPFRGPLSTAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 247
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 248 GVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
G HTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFI
Sbjct: 59 GFGGILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFI 118
Query: 428 GYSMQGLCKFRFL*SVQSXXXXXXXXXXXXXXXXXXVPGGRLRXRNSSPTIACRPWKPLX 607
GYSMQGL KF F V + IA P + +
Sbjct: 119 GYSMQGLGKFGFY-EVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADIALAPMEAVK 177
Query: 608 VRIQXMPGFREQPXREGV 661
VRIQ PG+ REGV
Sbjct: 178 VRIQTQPGW-AGTLREGV 194
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 417 PLSLGIQCRVSASFGFYEVFKVAYAGMLDDEXPTLTVPFVYLA 545
P +G + FGFYEVFK+ Y ML +E L +YLA
Sbjct: 115 PTFIGYSMQGLGKFGFYEVFKIMYGNMLGEEYSYLYRTSLYLA 157
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 547 ASASAEFIADNRLSPMEA 600
ASASAEF AD L+PMEA
Sbjct: 158 ASASAEFFADIALAPMEA 175
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 445
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 446 LCK 454
K
Sbjct: 989 AIK 991
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 296 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIG 54
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 263 CHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 424
C + T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 309 CSGLVAATISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 418
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +2
Query: 257 VFCHAV*XHTA---VVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWA 415
+FC AV A PLD+V+ R+Q++ KY + +GFKV VR EG GL KG
Sbjct: 685 LFCGAVAGAVAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMW 744
Query: 416 PTFI 427
P +
Sbjct: 745 PNLL 748
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 457
TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + + KF
Sbjct: 152 TATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGIKF 211
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +2
Query: 287 AVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 427
A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 344 ASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 177 TATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKG 409
T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG
Sbjct: 50 TSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKG 93
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAG 81
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 290 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 430
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 427
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 296 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 409
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)
Frame = +2
Query: 290 VVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKGWAPT 421
++P D++K R+QV ++Y V + F+ ++EEG GL KG AP+
Sbjct: 47 ILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKGLAPS 101
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +2
Query: 296 PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTFI 427
PLD+V+ RL V +++ N G ++R EEG+RGL KG P+ +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLV 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 290 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 427
V P +++K RL V YK + + K +REEG+ L KG P+F+
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +2
Query: 287 AVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 451
A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P + +
Sbjct: 110 ASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVL 169
Query: 452 KFRFL 466
F FL
Sbjct: 170 TFIFL 174
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +2
Query: 290 VVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 421
+ PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 155 LTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +2
Query: 242 LCGVVVFCHAV*XHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLA 403
LCG + + T PLD+V+ R+Q+ D KY +N F E+G+ RGL
Sbjct: 111 LCGALAGATS---QTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLY 167
Query: 404 KGWAPTFI 427
+G + ++
Sbjct: 168 RGLSINYL 175
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 296 PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 421
P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 134 PTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 263 CHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 412
C V A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 6 CATVFHDGAMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +2
Query: 296 PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFI 427
PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT +
Sbjct: 84 PLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL 131
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 284 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 427
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 296 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRF 463
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L +F
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVLRFLQF 211
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 281 HTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYS 436
HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S
Sbjct: 849 HTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS 902
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 136 PVDGRARGYRADRWHGGVCCG 198
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 317 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFRF 463
R + DA +K GF ++ +EEG L K T YS++GL KF F
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTF 958
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 134 CQSTVAPVAIEQTGGMAASAAVPTES 211
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_6885| Best HMM Match : GLE1 (HMM E-Value=0.00012)
Length = 150
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 134 CQSTVAPVAIEQTGGMAAS---AAVPTESCEFGSPKYFALCGVVVFCHAV*XHTAVVPLD 304
C++ +A ++Q G +S AA P+ + G F G ++ H +VPL
Sbjct: 3 CKNMLAKKIVQQGSGQVSSNHSAAFPSAAVAIGVWSAFPDVGDLILAHFYRECPFLVPLY 62
Query: 305 LVKCRLQVDAEKYKNVVNGFKVS 373
+ K + D + YK + G+++S
Sbjct: 63 IPKAQGTSDIDYYKGL--GYQIS 83
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 268 PESTAATESTVAPETTVSQETTVAPETTVPTET 300
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 334 PESTAATESTVAPETTVSQETTVAPETTVPTET 366
>SB_22271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 316 TLHQVEGHHGRVXSDRM-TEHHNSAKSEIFRRSKFTGLRGYRSRRRHATGLLDS 158
TL +++ HH + R T+H K +++R LRG R R R G D+
Sbjct: 32 TLPEIQAHHIQDTDLRKHTKHLIKCKDAVWKRWTDEYLRGLRERHRAKAGAPDT 85
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 242 LCGVVVFCHAV*XHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAP 418
+CG++ A P D+VK RLQ++ Y + + G+ GL +G P
Sbjct: 528 ICGIMAGAMA---SVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVP 583
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 79 VARCGAELSVPWPTIDRPVPVDGRARGYRADRWHGGVCCGTHGVL 213
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 367 PESTAATESTVAPETTVSQETTVAPETTVPTET 399
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 1436 PESTAATESTVAPETTVSQETTVAPETTVPTET 1468
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/85 (27%), Positives = 30/85 (35%)
Frame = -1
Query: 396 PRTPSSRTDTLKPFTTFLYFSASTWRRHFTRSRGTTAVXCQTA*QNTTTPQRAKYLGDPN 217
P T ++ T+ P TT +T T + TTA T TT P D
Sbjct: 1602 PETTAALETTVAPETTAA--PETTVPPEITAATETTAAPETTVGPETTAPPETTAAPDTT 1659
Query: 216 SQDSVGTAADAAMPPVCSIATGATV 142
A D M P ++A TV
Sbjct: 1660 VAGETTAAPDTTMAPEITVAPETTV 1684
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 2030 PESTAATESTVAPETTVSQETTVAPETTVPTET 2062
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 2330 PESTAATESTVAPETTVSQETTVAPETTVPTET 2362
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 1728 PESTAATESTVAPETTVSQETTVAPETTVPTET 1760
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PLSTAQCQSTVAP-VAIEQTGGMAASAAVPTES 211
P STA +STVAP + Q +A VPTE+
Sbjct: 2688 PESTAATESTVAPETTVSQETTVAPETTVPTET 2720
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,694,872
Number of Sequences: 59808
Number of extensions: 400437
Number of successful extensions: 1100
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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