Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060536.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.0  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   9.0  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 358 EVSD*RPSCRCIPDVVRSRDCKEAHRRVMYTPSRDGA 248
           EV+  R +CR  P    + DC +  R ++ TP+  G+
Sbjct: 8   EVNLSRRACR--PTTTNNDDCLQEQRTLLTTPTEGGS 42


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 612 SVRPAGEPTSVSTPATALRIQRRG 683
           +VRP+   TS+S  AT L+ Q  G
Sbjct: 841 NVRPSFTTTSISNGATTLQQQHAG 864


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 612 SVRPAGEPTSVSTPATALRIQRRG 683
           +VRP+   TS+S  AT L+ Q  G
Sbjct: 840 NVRPSFTTTSISNGATTLQQQHAG 863


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 358 QMAQFLCLRNI 390
           QM QFLCL+N+
Sbjct: 540 QMQQFLCLQNV 550


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 280 DGVLLCNLLNVLHPGCIDMKDVNQRPQMAQFLCLRNIKVFLRTCH 414
           +G+ L  L +     CI+  +        +F+C ++    +RTCH
Sbjct: 239 EGLFLPELYSYDEQSCIECAECRGLFSPQKFVCHQHEPQEIRTCH 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,855
Number of Sequences: 2352
Number of extensions: 16254
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)