Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060535.seq
(544 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 24 0.75
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 0.99
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 22 3.0
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 21 9.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.2
AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like prote... 21 9.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 9.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.2
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 24.2 bits (50), Expect = 0.75
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 120 TANINLYSER*HHLEQQYSGVNHQIREN 37
T N N + HH+ Q+ VNH + N
Sbjct: 317 TNNQNHHHHAGHHIHAQHHVVNHHVAAN 344
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 0.99
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 397 QXAEKSPIHLQSPQLQFRGSLVQXLRDATKKLGL 498
Q +P HLQSP Q S D+T G+
Sbjct: 77 QPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGV 110
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +2
Query: 335 LIMMTITIVSTGMRYGRAYLSRXQRNHRFICSHLS 439
L+M +TI+ + + + + S +N +FI L+
Sbjct: 27 LVMSAVTIILSSLIFNQEQWSSLNKNFQFIDKKLN 61
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 20.6 bits (41), Expect = 9.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 361 EYRDEIWKSLLEQXAEKSPIHLQSPQLQ 444
++RD+ + S+ E+ S + L PQ++
Sbjct: 133 KFRDKQYLSIAERAEFSSSLRLTEPQVK 160
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like protein
protein.
Length = 160
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 297 NFWAAXGRSMXPDTHKFNLAI 235
N W A S PDT NL I
Sbjct: 10 NTWRAFTASWSPDTLAKNLGI 30
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 41 HLQSPNTQTHPSASCKYADSTSSTGV 66
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
HLQSP Q S D+T G+
Sbjct: 85 HLQSPNTQTHPSASCKYADSTSSTGV 110
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,392
Number of Sequences: 336
Number of extensions: 2064
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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