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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060535.seq
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.75 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   0.99 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   3.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   9.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   9.2  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   9.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   9.2  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   9.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   9.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 120 TANINLYSER*HHLEQQYSGVNHQIREN 37
           T N N +    HH+  Q+  VNH +  N
Sbjct: 317 TNNQNHHHHAGHHIHAQHHVVNHHVAAN 344


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 397 QXAEKSPIHLQSPQLQFRGSLVQXLRDATKKLGL 498
           Q    +P HLQSP  Q   S      D+T   G+
Sbjct: 77  QPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGV 110


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +2

Query: 335 LIMMTITIVSTGMRYGRAYLSRXQRNHRFICSHLS 439
           L+M  +TI+ + + + +   S   +N +FI   L+
Sbjct: 27  LVMSAVTIILSSLIFNQEQWSSLNKNFQFIDKKLN 61


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 361 EYRDEIWKSLLEQXAEKSPIHLQSPQLQ 444
           ++RD+ + S+ E+    S + L  PQ++
Sbjct: 133 KFRDKQYLSIAERAEFSSSLRLTEPQVK 160


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 297 NFWAAXGRSMXPDTHKFNLAI 235
           N W A   S  PDT   NL I
Sbjct: 10  NTWRAFTASWSPDTLAKNLGI 30


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 41  HLQSPNTQTHPSASCKYADSTSSTGV 66


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 421 HLQSPQLQFRGSLVQXLRDATKKLGL 498
           HLQSP  Q   S      D+T   G+
Sbjct: 85  HLQSPNTQTHPSASCKYADSTSSTGV 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,392
Number of Sequences: 336
Number of extensions: 2064
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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