Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060535.seq
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.7  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   8.6  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 337  DYDDDYHCEYRDEIWKS-LLEQXAEKS 414
            DYDD+ H +Y  +I +S +L +  + S
Sbjct: 2500 DYDDESHAKYVSDIGRSKMLNESVDDS 2526


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 409 KSPIHLQSPQLQFRGSLVQXLRDATKKL 492
           K+PI++ S QL+    L    +D++KK+
Sbjct: 200 KTPIYVSSKQLEAFRQLQACPKDSSKKI 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,397
Number of Sequences: 2352
Number of extensions: 8569
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)