Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060535.seq
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070537-1|AAL48008.2|  699|Drosophila melanogaster LD12230p pro...    29   3.1  
AY069710-1|AAL39855.1|  844|Drosophila melanogaster LD48056p pro...    29   3.1  
AE013599-1660|AAS64862.1|  844|Drosophila melanogaster CG4616-PB...    29   3.1  
AE013599-1659|AAF58410.2|  844|Drosophila melanogaster CG4616-PA...    29   3.1  

>AY070537-1|AAL48008.2|  699|Drosophila melanogaster LD12230p
           protein.
          Length = 699

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 334 TDYDDDYHCEYRDEIWKSLLEQXAEKSPIHLQSPQ 438
           T+ DDD     +D+ WKS   + A+KS    +SP+
Sbjct: 97  TNKDDDKKSSSKDDAWKSRTREDAKKSVQRSKSPR 131


>AY069710-1|AAL39855.1|  844|Drosophila melanogaster LD48056p
           protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 334 TDYDDDYHCEYRDEIWKSLLEQXAEKSPIHLQSPQ 438
           T+ DDD     +D+ WKS   + A+KS    +SP+
Sbjct: 242 TNKDDDKKSSSKDDAWKSRTREDAKKSVQRSKSPR 276


>AE013599-1660|AAS64862.1|  844|Drosophila melanogaster CG4616-PB,
           isoform B protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 334 TDYDDDYHCEYRDEIWKSLLEQXAEKSPIHLQSPQ 438
           T+ DDD     +D+ WKS   + A+KS    +SP+
Sbjct: 242 TNKDDDKKSSSKDDAWKSRTREDAKKSVQRSKSPR 276


>AE013599-1659|AAF58410.2|  844|Drosophila melanogaster CG4616-PA,
           isoform A protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 334 TDYDDDYHCEYRDEIWKSLLEQXAEKSPIHLQSPQ 438
           T+ DDD     +D+ WKS   + A+KS    +SP+
Sbjct: 242 TNKDDDKKSSSKDDAWKSRTREDAKKSVQRSKSPR 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,123,914
Number of Sequences: 53049
Number of extensions: 368242
Number of successful extensions: 841
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)