Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060534.seq
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    26   0.95 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    26   0.95 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    26   0.95 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.7  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    23   6.7  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.9  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 514 EIWLTKARILCPATEIVSRTF 452
           EI  T+A + CP +EI+  TF
Sbjct: 638 EIACTRANVTCPRSEIILETF 658


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 514 EIWLTKARILCPATEIVSRTF 452
           EI  T+A + CP +EI+  TF
Sbjct: 638 EIACTRANVTCPRSEIILETF 658


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 514 EIWLTKARILCPATEIVSRTF 452
           EI  T+A + CP +EI+  TF
Sbjct: 616 EIACTRANVTCPRSEIILETF 636


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -3

Query: 482 PG-NGDRIPYLLIDIEGKVTEKAYPLRLF----DPVKMRISWIKH 363
           PG NG   P  ++D  GKV EK    RL     DP  +R+S  +H
Sbjct: 551 PGSNGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQH 595


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 529 ARHCREIWLTKARILCPATEIVS 461
           A  CRE+ L K+++ C A   +S
Sbjct: 23  AEDCRELGLIKSQLFCSACSSLS 45


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 435 ALDVYQKVRDTISVAGHKIRAFV 503
           A D+ QK R   +   H++RAF+
Sbjct: 71  AFDIMQKDRREFNKRSHEVRAFL 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,621
Number of Sequences: 2352
Number of extensions: 12250
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)