Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060534.seq
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60591-1|AAC47275.1| 1239|Drosophila melanogaster kuzbanian prot...    29   4.4  
BT009943-1|AAQ22412.1| 1091|Drosophila melanogaster SD03071p pro...    29   4.4  
AE014134-2376|AAN10838.1| 1238|Drosophila melanogaster CG7147-PB...    29   4.4  
AE014134-2375|AAF53318.1| 1238|Drosophila melanogaster CG7147-PA...    29   4.4  
AE014134-2374|AAX52664.1| 1090|Drosophila melanogaster CG7147-PC...    29   4.4  

>U60591-1|AAC47275.1| 1239|Drosophila melanogaster kuzbanian protein.
          Length = 1239

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 498  RHGFCARQRRSYPVPFDRHRGQGNRKSVPVAFVRSSKN--ANQLDKTHG 358
            RHG      + +P  +DRH+G  +   +P     SS+N  ANQ  ++ G
Sbjct: 1003 RHGGSRSHHQQHPHDWDRHQGGHSIVPLPTGGSHSSRNSAANQARRSDG 1051


>BT009943-1|AAQ22412.1| 1091|Drosophila melanogaster SD03071p protein.
          Length = 1091

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 498  RHGFCARQRRSYPVPFDRHRGQGNRKSVPVAFVRSSKN--ANQLDKTHG 358
            RHG      + +P  +DRH+G  +   +P     SS+N  ANQ  ++ G
Sbjct: 1003 RHGGSRSHHQQHPHDWDRHQGGHSIVPLPTGGSHSSRNSAANQARRSDG 1051


>AE014134-2376|AAN10838.1| 1238|Drosophila melanogaster CG7147-PB,
            isoform B protein.
          Length = 1238

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 498  RHGFCARQRRSYPVPFDRHRGQGNRKSVPVAFVRSSKN--ANQLDKTHG 358
            RHG      + +P  +DRH+G  +   +P     SS+N  ANQ  ++ G
Sbjct: 1002 RHGGSRSHHQQHPHDWDRHQGGHSIVPLPTGGSHSSRNSAANQARRSDG 1050


>AE014134-2375|AAF53318.1| 1238|Drosophila melanogaster CG7147-PA,
            isoform A protein.
          Length = 1238

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 498  RHGFCARQRRSYPVPFDRHRGQGNRKSVPVAFVRSSKN--ANQLDKTHG 358
            RHG      + +P  +DRH+G  +   +P     SS+N  ANQ  ++ G
Sbjct: 1002 RHGGSRSHHQQHPHDWDRHQGGHSIVPLPTGGSHSSRNSAANQARRSDG 1050


>AE014134-2374|AAX52664.1| 1090|Drosophila melanogaster CG7147-PC,
            isoform C protein.
          Length = 1090

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 498  RHGFCARQRRSYPVPFDRHRGQGNRKSVPVAFVRSSKN--ANQLDKTHG 358
            RHG      + +P  +DRH+G  +   +P     SS+N  ANQ  ++ G
Sbjct: 1002 RHGGSRSHHQQHPHDWDRHQGGHSIVPLPTGGSHSSRNSAANQARRSDG 1050


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,660,644
Number of Sequences: 53049
Number of extensions: 511007
Number of successful extensions: 1059
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)