Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060533.seq
(678 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopheri... 72 1e-11
UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9; Euteleostom... 63 7e-09
UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma j... 60 4e-08
UniRef50_O60518 Cluster: Ran-binding protein 6; n=68; Eumetazoa|... 51 2e-05
UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep: ... 47 4e-04
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno... 43 0.008
UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1; Schizosac... 42 0.010
UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.042
UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2; Ca... 39 0.097
UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN bindin... 38 0.30
UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2; Ost... 37 0.39
UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.39
UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, ... 36 0.91
UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase... 33 4.8
UniRef50_Q94LC1 Cluster: Putative uncharacterized protein OSJNBa... 33 6.4
>UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopherin
3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Karyopherin 3 CG1059-PA - Apis mellifera
Length = 1040
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFT 465
RRK C+V +E+AR ID+DGNNQWPEFLQ +F CA++ P +KE + MFT
Sbjct: 120 RRKVCEVAAEVARNLIDEDGNNQWPEFLQFLFQCANSPVPALKENALRMFT 170
Score = 57.2 bits (132), Expect = 3e-07
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 17/77 (22%)
Frame = +2
Query: 11 AGDQAQFYQLLNTLLSTXNDIRSQAE-----------------DAYNNIPTXTKVVHLVN 139
A D QF QLLNTLLST ND R+QAE DAYNN+P +KV L+
Sbjct: 2 AADLDQFQQLLNTLLSTDNDARTQAEVQHVANMLSEFACGHHSDAYNNLPVDSKVTFLLT 61
Query: 140 SIQNADIAEDVRQXAAV 190
S+ NA + E++R AAV
Sbjct: 62 SLCNATLTEEMRAMAAV 78
>UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9;
Euteleostomi|Rep: RAN binding protein 5 - Homo sapiens
(Human)
Length = 126
Score = 62.9 bits (146), Expect = 7e-09
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMF 462
R+K CD+ +ELAR ID+DGNNQWPE L+ +F+ S+Q+ ++EA + +F
Sbjct: 77 RKKVCDIAAELARNLIDEDGNNQWPEGLKFLFDSVSSQNVGLREAALHIF 126
>UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08761 protein - Schistosoma
japonicum (Blood fluke)
Length = 183
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNR 492
RRK D++SEL R DDDGN++WPEF + + +++ D ++E +F VP + GN+
Sbjct: 120 RRKVADLISELVRMEFDDDGNSRWPEFTPILLDWSTSPDSGLREIACHIFGSVPSLFGNQ 179
>UniRef50_O60518 Cluster: Ran-binding protein 6; n=68;
Eumetazoa|Rep: Ran-binding protein 6 - Homo sapiens
(Human)
Length = 1105
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNR 492
R+K CD+ + LAR ID+DG N WPE L+ + + +++ + E + +F PG+ G +
Sbjct: 114 RKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQ 173
Query: 493 XTGNL 507
+L
Sbjct: 174 ERHDL 178
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 17 DQAQFYQLLNTLLSTXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAEDVRQXAA 187
++ +FYQLL L++ +R QAE+ Y NIP K L+++++N +VRQ AA
Sbjct: 15 EKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAA 71
>UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep:
Karyopherin - Aspergillus oryzae
Length = 1095
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGV 480
R+K D V+E+AR + D+ +QWPE L +F + + D ++EA +F+ PG+
Sbjct: 118 RKKIGDAVAEIARQYTDN--GDQWPELLGVLFQASQSPDAGLREAAFRIFSTTPGI 171
>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1116
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 316 RKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXG 486
+K CD VSELA + D G WPE L MF C ++ + ++EA + +F + G
Sbjct: 122 KKLCDTVSELASGILPDGG---WPELLPFMFQCVTSSNFKLQEAALLIFAQLSQYIG 175
>UniRef50_O74476 Cluster: Importin beta-3 subunit; n=1;
Schizosaccharomyces pombe|Rep: Importin beta-3 subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 1095
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVP 474
R K CD ++E+AR D G +WPE + +FN ++ D + +E+ T +P
Sbjct: 116 RNKLCDTIAEIARSIYDCQG--EWPELINVIFNAVNSPDESFRESVFRTITSLP 167
>UniRef50_A6R7C2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1091
Score = 40.3 bits (90), Expect = 0.042
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGV 480
R K D V+E+A + D+ QW E L +F + + DP ++++ +F+ PG+
Sbjct: 118 RNKIGDAVAEIAGQYADN--GEQWSELLGVLFQASQSTDPGMRDSAFRIFSTTPGI 171
>UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2;
Caenorhabditis|Rep: Importin beta family protein 3 -
Caenorhabditis elegans
Length = 1092
Score = 39.1 bits (87), Expect = 0.097
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +2
Query: 17 DQAQFYQLLNTLLSTXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAEDVRQXAAV 190
D QF +L+ L S NDIR QAE+ Y I TKV L + + D R V
Sbjct: 2 DVNQFTELITKLQSADNDIRKQAEEVYEKIEGPTKVAALFEAYTHHTNNSDARSTVLV 59
Score = 39.1 bits (87), Expect = 0.097
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNR 492
++K D++SE+A IDD G+ W L+ M +C ++D + + P + GNR
Sbjct: 101 KKKIADLISEIASNLIDDSGDMTWGGVLELMDHCLKSEDLTGNYIALLILRGCPIIFGNR 160
>UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN binding
protein 5; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to RAN binding protein 5 - Rattus norvegicus
Length = 1056
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 86 EDAYNNIPTXTKVVHLVNSIQNADIAEDVRQXAAV 190
E+ Y NIP +K+ L+ +I+N AE+ RQ AAV
Sbjct: 154 EETYENIPGRSKITFLLQAIRNTTAAEEARQMAAV 188
>UniRef50_Q00SR0 Cluster: Karyopherin (Importin) beta 3; n=2;
Ostreococcus|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1517
Score = 37.1 bits (82), Expect = 0.39
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 316 RKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNRX 495
RK CD++ E+A + D WPE + MF+ S +KE+ + +F + +
Sbjct: 826 RKTCDLICEVAAGGSERD--EPWPELMPFMFSAVSEGGEGLKESALNVFAMLAPLMSEAL 883
Query: 496 TGNL 507
G +
Sbjct: 884 VGQI 887
>UniRef50_A4QRM7 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1144
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGV 480
R K D V+E+AR D+G + WP+ L +F + A D +E +F PG+
Sbjct: 118 RNKISDAVAEVAR-QCSDNGVS-WPDLLAALFQLSMAPDAGKREISFRVFATTPGI 171
>UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1922, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1180
Score = 35.9 bits (79), Expect = 0.91
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 316 RKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEA 447
+K CD VSELA + ++G WP L MF C + ++EA
Sbjct: 859 KKLCDTVSELASSILLENG---WPNLLSFMFQCMTFDSTKLQEA 899
>UniRef50_Q22UQ4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1113
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 325 CDVVSELARXHIDD-DGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFT 465
CD + EL ++D D NQWPE + +++ + + E+G + T
Sbjct: 158 CDCIGELGGSLLEDKDAGNQWPELISIVWSLFMKESVELLESGFKILT 205
>UniRef50_Q8TI39 Cluster: Phycocyanin alpha phycocyanobilin lyase
related protein; n=2; Methanosarcina|Rep: Phycocyanin
alpha phycocyanobilin lyase related protein -
Methanosarcina acetivorans
Length = 508
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 8 RAGDQAQFYQLLNTLLSTXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAEDVR 175
+ GD+ +L+ L S DIR A +A N+ V HLV + ADI+ +VR
Sbjct: 339 KIGDEKALAAILSRLDSPYPDIRKHAAEALGNLRDEKAVPHLVKKL--ADISPEVR 392
>UniRef50_Q94LC1 Cluster: Putative uncharacterized protein
OSJNBa0026A15.29; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0026A15.29 - Oryza sativa
(Rice)
Length = 151
Score = 33.1 bits (72), Expect = 6.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 88 GRIQQHSNXNKSSAPSEFNSKCRHCRRCASXGGRA 192
GRIQ+ ++ AP+EF S C RR GGR+
Sbjct: 8 GRIQRPASATPCCAPAEFGSACGPARRTTIGGGRS 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,883,469
Number of Sequences: 1657284
Number of extensions: 7411428
Number of successful extensions: 13348
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13343
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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