Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060533.seq
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/56 (21%), Positives = 23/56 (41%)
 Frame = -2

Query: 584 FXLPEFRKPXDSIGLQSRLXTAFYHTKFPVXRFPXTPGTXVNIPIPASLMFGSCAL 417
           +  P  + P   +  +     A +HT      +P +PG     P P++L   + +L
Sbjct: 165 YPFPAGQYPYPILSPEMSQVAASWHTP---SMYPLSPGAGFRSPYPSALPISTSSL 217


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/56 (21%), Positives = 23/56 (41%)
 Frame = -2

Query: 584 FXLPEFRKPXDSIGLQSRLXTAFYHTKFPVXRFPXTPGTXVNIPIPASLMFGSCAL 417
           +  P  + P   +  +     A +HT      +P +PG     P P++L   + +L
Sbjct: 57  YPFPAGQYPYPILSPEMSQVAASWHTP---SMYPLSPGAGFRSPYPSALPISTSSL 109


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -2

Query: 560 PXDSIGLQSRLXTAFYHTKFPVXRFPXTPGTXVNIP 453
           P  +  L S    A  H   P   FP  PG  +NIP
Sbjct: 197 PGGAPPLVSPFLAAMAHRP-PHFAFPGAPGHILNIP 231


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 221 RILH*IIFVTARPPFDAHLRQCLH 150
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 221 RILH*IIFVTARPPFDAHLRQCLH 150
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 221 RILH*IIFVTARPPFDAHLRQCLH 150
           R+LH +   T   P+DA   QC++
Sbjct: 83  RLLHDLKGRTTSVPYDALTGQCIY 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,324
Number of Sequences: 336
Number of extensions: 1886
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)