Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060533.seq
(678 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p pro... 75 1e-13
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ... 75 1e-13
U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyro... 31 1.4
AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p pro... 31 1.4
AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9 signalo... 31 1.4
AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB... 31 1.4
AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA... 31 1.4
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 29 5.8
>BT003793-1|AAO41476.1| 1000|Drosophila melanogaster GH07384p
protein.
Length = 1000
Score = 74.5 bits (175), Expect = 1e-13
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNR 492
RRK C+VV+E+AR ID+D NNQWP+ LQ +F CA++ P ++E+ + +F+ VP + GN+
Sbjct: 103 RRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQ 162
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2
Query: 11 AGDQAQFYQLLNTLLSTXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAEDVRQXAAV 190
A DQA F QLL +LLST ND+R QAE+AYNN+ KV HL+ +IQN +E+ RQ AAV
Sbjct: 2 AADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
protein.
Length = 1105
Score = 74.5 bits (175), Expect = 1e-13
Identities = 29/60 (48%), Positives = 45/60 (75%)
Frame = +1
Query: 313 RRKXCDVVSELARXHIDDDGNNQWPEFLQXMFNCASAQDPNIKEAGIGMFTXVPGVXGNR 492
RRK C+VV+E+AR ID+D NNQWP+ LQ +F CA++ P ++E+ + +F+ VP + GN+
Sbjct: 103 RRKICEVVAEVARNLIDEDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQ 162
Score = 73.7 bits (173), Expect = 2e-13
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +2
Query: 11 AGDQAQFYQLLNTLLSTXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAEDVRQXAAV 190
A DQA F QLL +LLST ND+R QAE+AYNN+ KV HL+ +IQN +E+ RQ AAV
Sbjct: 2 AADQAHFQQLLASLLSTDNDVRQQAEEAYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
>U57758-1|AAB49932.1| 360|Drosophila melanogaster putative thyroid
receptor interactingprotein protein.
Length = 360
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 QFYQLLNTLL-STXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAE 166
++ L N L+ S N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AY069836-1|AAL39981.1| 444|Drosophila melanogaster SD08021p
protein.
Length = 444
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 QFYQLLNTLL-STXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAE 166
++ L N L+ S N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AF129079-1|AAD28604.1| 444|Drosophila melanogaster COP9
signalosome subunit 2 CSN2 protein.
Length = 444
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 QFYQLLNTLL-STXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAE 166
++ L N L+ S N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014134-1594|AAF52736.1| 444|Drosophila melanogaster CG9556-PB,
isoform B protein.
Length = 444
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 QFYQLLNTLL-STXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAE 166
++ L N L+ S N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014134-1593|AAN10685.1| 444|Drosophila melanogaster CG9556-PA,
isoform A protein.
Length = 444
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 QFYQLLNTLL-STXNDIRSQAEDAYNNIPTXTKVVHLVNSIQNADIAE 166
++ L N L+ S N SQ Y N P + +LVNS QN DI E
Sbjct: 279 KYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINE 326
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 29.1 bits (62), Expect = 5.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 91 RIQQHSNXNK-SSAPSEFNSKCRHCRRCASXGGRAVTKII*CRI 219
+++QH+N N +S PS RHC RC + GR + CR+
Sbjct: 10 QLEQHNNHNAHTSDPS------RHCARCTTELGRITNRGAPCRV 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,267,625
Number of Sequences: 53049
Number of extensions: 361460
Number of successful extensions: 652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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