Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060532.seq
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 105 4e-23
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 90 1e-18
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 73 2e-13
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 73 2e-13
08_01_0397 - 3509186-3510291,3510322-3512335 70 1e-12
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 64 1e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 63 2e-10
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 61 9e-10
03_05_0865 - 28365430-28367640 60 2e-09
06_03_1255 + 28780181-28781172,28782065-28782932 51 1e-06
02_01_0381 - 2764331-2764342,2768966-2769907 51 1e-06
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 50 1e-06
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 48 5e-06
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 48 9e-06
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 48 9e-06
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 47 1e-05
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 47 1e-05
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 47 1e-05
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 47 2e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 47 2e-05
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 46 2e-05
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 46 3e-05
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 46 4e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 46 4e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 45 6e-05
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 45 6e-05
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 44 9e-05
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 43 2e-04
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 42 3e-04
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 42 5e-04
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 42 6e-04
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 41 8e-04
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 41 8e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 41 0.001
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 40 0.002
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 39 0.003
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 36 0.023
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 36 0.039
03_02_0189 - 6253659-6255380 35 0.052
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 35 0.069
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 35 0.069
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 34 0.12
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 33 0.21
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 32 0.37
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 32 0.37
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 32 0.49
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 32 0.49
02_01_0091 + 646299-649082 32 0.49
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 31 1.1
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 2.0
11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636 29 2.6
02_05_1114 + 34218218-34218463,34219143-34219179,34219450-342196... 29 2.6
01_07_0205 - 41978437-41980599,41980805-41981215 29 3.4
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 29 4.5
07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823 29 4.5
04_03_0835 + 20178224-20179483 29 4.5
02_03_0219 + 16541350-16541482,16541605-16541765,16541863-165419... 29 4.5
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 6.0
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 105 bits (251), Expect = 4e-23
Identities = 44/90 (48%), Positives = 61/90 (67%)
Frame = +2
Query: 239 PRLGFFSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 418
P+ F SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 419 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
Y Q + G+ EPTPIQ+QGWP+A+ G++
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRD 195
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/49 (63%), Positives = 43/49 (87%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++G+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA
Sbjct: 194 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELA 242
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = +2
Query: 224 AEHATPRLGFFSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE 403
A+ A L F KNFY P+V + EVE YR + E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 404 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
FP+YV Q + G+ EPTPIQ+QGWP+A+ G++
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRD 130
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/49 (73%), Positives = 44/49 (89%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++L+G+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELA 177
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSKV 669
++ +G+A+TGSGKTLA++LP + H+ +QPP+ GDGPI L++APTREL S +
Sbjct: 323 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDI 378
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 442
QPF KN Y + + EV YR E+ V G +V PI+ + ++ + +K
Sbjct: 243 QPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 302
Query: 443 MGYKEPTPIQAQGWPIAMSGKN 508
+G+++P PIQAQ PI MSG++
Sbjct: 303 LGFEKPMPIQAQALPIIMSGRD 324
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 442
+PFNK+FY+ P+V S EV +Y + VSG +V PI+ F + FP + +
Sbjct: 177 EPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAK 236
Query: 443 MGYKEPTPIQAQGWPIAMSGKN 508
GY++PT IQ Q PI +SG++
Sbjct: 237 QGYEKPTTIQCQALPIVLSGRD 258
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/49 (57%), Positives = 41/49 (83%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++G+A+TGSGKT A++LP IVHI +QP + + +GPI +V APTRELA
Sbjct: 257 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELA 305
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 70.1 bits (164), Expect = 1e-12
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELATTKFSKV 669
++ +G+A+TGSGKTLA++LP + H+ +QP + GDGPI L++APTREL S +
Sbjct: 462 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDI 517
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 442
QPF KNFY + K + EV YR + E+ V G +V PI+ + ++ + +K
Sbjct: 382 QPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 441
Query: 443 MGYKEPTPIQAQGWPIAMSGKN 508
+G+++P IQAQ PI MSG++
Sbjct: 442 LGFEKPMSIQAQALPIIMSGRD 463
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +2
Query: 329 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 496
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAT 651
+++V +A+TGSGKTL Y+LP +HI R GP LVLAPTRELAT
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTRELAT 236
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +2
Query: 329 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 509 *LA 517
+A
Sbjct: 220 IVA 222
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAT 651
+++V VA+TGSGKTL Y++P + + R DGP LVL+PTRELAT
Sbjct: 218 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELAT 266
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 433
S++P ++ F P+ P++ + YR HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 434 VKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
+ G+ PTPIQAQ WP+A+ ++ +A
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVA 646
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAT 651
+++V +A+TGSGKTL Y++PA +H+ N P + GP LVLAPTRELA+
Sbjct: 642 RDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPTRELAS 690
>03_05_0865 - 28365430-28367640
Length = 736
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 648
++++G+A+TGSGKT A++LP + +I PPI +GP A+V+APTRELA
Sbjct: 353 RDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELA 404
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +2
Query: 335 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRD 354
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 648
++++G+A TGSGKTL ++LP I+ + PI G+GP L++ P+RELA
Sbjct: 211 RDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELA 262
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 472
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 473 AQGWPIAMSGKN 508
QG P+A+SG++
Sbjct: 201 VQGLPVALSGRD 212
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 472
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 473 AQGWPIAMSGKN 508
QG P+ +SG++
Sbjct: 210 VQGLPVVLSGRD 221
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVLAPTRELATTKFSKV 669
++++G+A TGSGKTL ++LP I V + + PI G+GP +++ P+RELA + +
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVI 278
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 418 LCATRCKDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHI--NNQPP 591
LCA G Q + + + + ++ A TG+GKTLAY+ P IVH+ +P
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPR 92
Query: 592 IRRGDGPIALVLAPTREL 645
+ R DG ALVL PTREL
Sbjct: 93 VERTDGTFALVLVPTREL 110
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 443 MGYKEPTPIQAQGWPIAMSGKN 508
MG++ PT IQAQ P+AMSG++
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQH 63
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +1
Query: 493 YVWKELVGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIA-LVLAPTRELA 648
Y+ K+++ A+TG+GKT+A++LPAI ++ PPI + PI+ +V+ PTRELA
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELA 544
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELA 648
K++VG A+TG+GKTLA+ +P + I + G P+A+VLAPTRELA
Sbjct: 136 KDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELA 185
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPTRELA 648
++ +G+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELA
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-VPRVLVLSPTRELA 180
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
P+ F P V K G++ P+PIQA WP + G++
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRD 131
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Frame = +1
Query: 490 SYVWKELVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPTRELA 648
S ++L+ AQTGSGKT A+ P I I + PP RG P+AL+L+PTREL+
Sbjct: 357 SIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 414
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G++ +A
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 365
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELA 648
K+++G A+TG+GKTLA+ +P + I + G P+A++LAPTRELA
Sbjct: 131 KDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELA 180
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
Frame = +1
Query: 490 SYVWKELVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPTRELA 648
S ++L+ AQTGSGKT A+ P I I +++PP R RG P+AL+L+PTREL+
Sbjct: 271 SIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELS 328
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G++ +A
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 279
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELA 648
++L+ A+TG+GKTLA+ +P I + + +RRG P LVLAPTRELA
Sbjct: 168 RDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELA 219
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTREL 645
+ L+ A TGSGKT ++++P I H ++ R D GP+A+VLAPTREL
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTREL 269
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 323 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 502
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 503 KN 508
++
Sbjct: 220 RS 221
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
K+++G A+TGSGKTLA+++PAI +++ + R +G +V+ PTRELA
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPTRELA 181
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +1
Query: 490 SYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPTRELA 648
S ++L+ AQTGSGKT A+ P I I PP +R P+AL+L+PTREL+
Sbjct: 189 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
V SG EV P+ F E + + ++ Y PTP+Q PI+++G++ +A
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMA 197
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++++G+A+TGSGKT A+ LP I+H + P G AL LAPTRELA
Sbjct: 115 RDVLGIAETGSGKTAAFALP-ILHRLGEDPY----GVAALALAPTRELA 158
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 353 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G++ +A
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMA 126
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/67 (43%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILP-----------AIVHINNQPPIRRGDGPIALVLAPTRELA 648
++L+ AQTGSGKT A+ LP I H R P ALVLAPTRELA
Sbjct: 122 RDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELA 181
Query: 649 TTKFSKV 669
F V
Sbjct: 182 AQSFDNV 188
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +2
Query: 338 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 505
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA--TTKFSKVAA 675
+E A TGSGKTLA++ P ++ I +P + +G A++L PTRELA TT+ K A
Sbjct: 184 RECFACAPTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTRELAAQTTRECKKLA 239
Query: 676 E 678
+
Sbjct: 240 K 240
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 436 KDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--- 606
KD G +R + L K+++ A+TG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRP 81
Query: 607 GPIALVLAPTRELA 648
LV+ PTRELA
Sbjct: 82 SINLLVMCPTRELA 95
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINN--QPPIRR---GDGPIALVLAPTRELA 648
+LVG A+TG GKTLA++LP + + N RR G P LVL PTRELA
Sbjct: 143 DLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELA 195
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +1
Query: 436 KDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 615
KD G ++ + L ++++ A+TG+GKT+A++LPAI ++ P R
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP---RSPSIN 146
Query: 616 ALVLAPTRELATTKFSKVAAE 678
LV+ PTRELA ++VAAE
Sbjct: 147 LLVICPTRELA----NQVAAE 163
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAT 651
++ +A+TGSGKT A+++P I + G G AL+L+PTR+LAT
Sbjct: 65 DIAAMARTGSGKTAAFLVPMIQRLRRHD---AGAGIRALILSPTRDLAT 110
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 502
FE + V +GV+ GY+ PTPIQ + P+ ++G
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG 63
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/72 (27%), Positives = 40/72 (55%)
Frame = +1
Query: 436 KDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 615
K G +R ++ + K++ A TGSGKTLA+++P + + +P + +
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVL 98
Query: 616 ALVLAPTRELAT 651
++++PTREL++
Sbjct: 99 GIIISPTRELSS 110
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
++L+G+ QTGSGKT A+ LP I + Q + A VL+PTRELA
Sbjct: 79 RDLIGLGQTGSGKTGAFALPIIQALLKQD---KPQALFACVLSPTRELA 124
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 383 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
P + E P+ V MG+KEPT IQA+ P A+ G++
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRD 80
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +1
Query: 433 CKDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 612
C+ G Q+ ++ + + +++ G A TGSGKT A+ LP + + +P +R
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP--KRVPAI 266
Query: 613 IALVLAPTRELATTKFSKV 669
L+L PTRELA S +
Sbjct: 267 RVLILTPTRELAAQVHSMI 285
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
F E N + + + +GY++PTPIQA P+A++G++
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRD 233
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTREL 645
K++V A+TGSGKT AY+LP ++ ++ + IR+ P +L PTREL
Sbjct: 121 KDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPTREL 170
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
F+E + +++ ++ G + TPIQ + P+ + GK+ +A
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVA 125
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELA 648
++++GV QTGSGKT A+ LP I Q + P A VLAPTRELA
Sbjct: 21 RDVIGVGQTGSGKTAAFALPII-----QALLEHEHRPCFFACVLAPTRELA 66
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 505 ELVGVAQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELA 648
+++ A+TGSGKTLA+++PAI + P R G G +VL PTRELA
Sbjct: 125 DVMASAKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCPTRELA 171
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +1
Query: 439 DNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGP 612
D G +T + L K+++ A+TG+GK+ A++LPAI + N + P
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSP 418
Query: 613 I-ALVLAPTRELA 648
I +L+L PTRELA
Sbjct: 419 IFSLILCPTRELA 431
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAPTRELATTKF 660
Q+GSGKTLAY+ P + ++ + + R P +VL PT ELA+ F
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVF 334
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 35.5 bits (78), Expect = 0.039
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 15/70 (21%)
Frame = +1
Query: 484 ADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGD----------GPI-A 618
A ++ K+++G A+TGSGKTLA+ LP + + + + R D P+ A
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRA 234
Query: 619 LVLAPTRELA 648
L+L PTRELA
Sbjct: 235 LILTPTRELA 244
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 434 VKTMGYKEPTPIQAQGWPIA 493
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>03_02_0189 - 6253659-6255380
Length = 573
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHIN--NQPPIRRG----DGPIALVLAPTREL 645
TGSGKTLAY+LP + I +P + G G A+++AP+REL
Sbjct: 177 TGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSREL 222
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 645
TGSGKTLAY+LP + I Q + G A+++AP+REL
Sbjct: 639 TGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSREL 684
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 520 AQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELA--TTKFSKVAA 675
AQTGSGKTLAY+L I+ + ++ ALV+ PTREL TK +++ A
Sbjct: 85 AQTGSGKTLAYLLSVFSAIDFGRSSVQ------ALVVVPTRELGMQVTKVARILA 133
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 413 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
P++V Q + +GY PT +Q Q P+ +SG++
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQD 80
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 33.9 bits (74), Expect = 0.12
Identities = 11/23 (47%), Positives = 21/23 (91%)
Frame = +1
Query: 502 KELVGVAQTGSGKTLAYILPAIV 570
++++G A+TGSGKTLA+++P ++
Sbjct: 118 RDVLGAAKTGSGKTLAFVIPVLM 140
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 439 DNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 618
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ + +
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEK-----NAIQV 205
Query: 619 LVLAPTRELA 648
++L PTRELA
Sbjct: 206 VILVPTRELA 215
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAK 541
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 439 DNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 618
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ + +
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEK-----NAIQV 218
Query: 619 LVLAPTRELA 648
++L PTRELA
Sbjct: 219 VILVPTRELA 228
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAK 541
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +1
Query: 439 DNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 618
+ G +R + + +++ A+ G+GKT A+ +PA+ I+ +
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDK-----NAIQV 195
Query: 619 LVLAPTRELA 648
++L PTRELA
Sbjct: 196 VILVPTRELA 205
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA*PKRVPAK 541
FE+ + G+ G++ P+PIQ + PIA++G + LA K K
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 511 VGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELATTKFSKV 669
+ V TGSGKT+ ++ A H +R G+ P I + LAPT L +F +
Sbjct: 56 IAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVI 107
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 526 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 648
TGSGKTLAY LP + + R+ ALV+ PTR+LA
Sbjct: 83 TGSGKTLAYALPIVQML----ATRKVRCLRALVVLPTRDLA 119
>02_01_0091 + 646299-649082
Length = 927
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 445 GLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 624
G+ + AH + + + + +V T SGK+L Y +P + I+ + P AL
Sbjct: 184 GVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS------QSSAPCALY 237
Query: 625 LAPTRELA 648
+ PT+ LA
Sbjct: 238 IFPTKALA 245
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Frame = +1
Query: 445 GLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHI---------NNQPPIR 597
GL R ++ + +++ A+TGSGKT Y++P I + N +
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVT 160
Query: 598 RGDGPIALVLAP 633
G IALVL P
Sbjct: 161 SGSPNIALVLCP 172
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = +1
Query: 520 AQTGSGKTLAYILPAI-VHINN 582
+ TGSGKTLAY+LP + + I N
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIEN 175
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 386 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 502
+ FEE + V + MG +PT IQ G P ++G
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAG 147
>11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636
Length = 950
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 418 LCATRCKDNGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQP 588
LCA C+D G T H ++ + K L+G + SG L+ +L + NN P
Sbjct: 333 LCAKLCRDLGSHLTGNHGHDNFSE--LRKVLLGNYDSFSGSALSCLLYLGIFPNNHP 387
>02_05_1114 +
34218218-34218463,34219143-34219179,34219450-34219633,
34219725-34219873,34220271-34220504,34220592-34220781,
34220863-34220988,34221386-34221485,34221598-34221957
Length = 541
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 671 ATLLNLVVANSLVGAKTKAIGPSPLRIGGWL 579
ATLLN+ ++N ++ KA P LR+GG L
Sbjct: 77 ATLLNMDLSNKILLNAVKAFSPLKLRLGGSL 107
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 418 LCATRCKDNGLQRTDAHSSSRLADSYVWK--ELVGVAQTGSGKTLAYILPAIVHINNQPP 591
L TR +N + A+ +LAD YVW + + + G+ L +I A+V I++ P
Sbjct: 243 LMTTR-SENKSSTSRAYYLGKLADEYVWSIAKQIAFVKEEEGQDLVHIKEAVVTISDGIP 301
Query: 592 I 594
+
Sbjct: 302 L 302
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 231 MRRPDWDSFHSNLSTKTFMIHILQFSKDHH 320
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>07_01_0762 - 5852168-5852266,5852409-5852569,5852691-5852823
Length = 130
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 266 VGVKRIPIWASHVLPSREF 210
VGVK I W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
>04_03_0835 + 20178224-20179483
Length = 419
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 442 NGLQRTDAHSSSRLADSYVWKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-- 615
NGL+ T A +SSR A+ Y + L Q G +++ A +P + R D P
Sbjct: 250 NGLRDTAAIASSRAAELYGMEVLADGIQDDCGNVTRFVMLA-----REPIVPRTDRPFKT 304
Query: 616 ALVLAPTRELATTKFSKVAA 675
++V A +E + F ++A
Sbjct: 305 SIVFAHDKEGTSVLFKVLSA 324
>02_03_0219 +
16541350-16541482,16541605-16541765,16541863-16541940,
16543176-16543445
Length = 213
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 266 VGVKRIPIWASHVLPSREF 210
VGVK I W + +LPSR+F
Sbjct: 81 VGVKEIESWTARLLPSRQF 99
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 314 SPYEVEEYRNKHEVTVSGVEVHN 382
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,054,157
Number of Sequences: 37544
Number of extensions: 391812
Number of successful extensions: 1058
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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