Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060532.seq
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    45   2e-06
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.2  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.2  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   3.8  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   5.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
 Frame = +1

Query: 502 KELVGVAQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELA 648
           ++L+  AQTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELA 262



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +2

Query: 350 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++ +A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -2

Query: 152 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 12
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -1

Query: 225 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 130
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 499 WKELVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 609
           +K L   AQ  + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +3

Query: 225 QNMRRPDWDSFHSNLSTKTFMIHILQFSKDHHMKSKSIEINTR 353
           QN+ RP+       L+T  F +++ Q  +  H++   + I +R
Sbjct: 94  QNISRPNLGELFQKLTTGFFSLNLFQIGQ--HVRGVLVSIKSR 134


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 302 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 394
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,139
Number of Sequences: 2352
Number of extensions: 14711
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)